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scnpilot_solids2_trim150_scaffold_3024

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3024_1
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..888
-----------------
DNA (888bp)
protein (296aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000371B117 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS09061.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
thiamine biosynthesis associated protein; K15598 putative hydroxymethylpyrimidine transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_3024_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1102..2775)
-----------------
DNA (1674bp)
protein (558aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] rbh
Dihydroxy-acid dehydratase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I292_9RHIZ rbh
scnpilot_solids2_trim150_scaffold_3024_3
bacterium YEK0313, Bacteria

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comp(2957..3283)
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036C7527
Uncharacterized protein {ECO:0000313|EMBL:CEJ10466.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3024_4
bacterium YEK0313, Bacteria

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3604..5169
-----------------
DNA (1566bp)
protein (522aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] rbh
2-isopropylmalate synthase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEY5_XANP2 rbh
scnpilot_solids2_trim150_scaffold_3024_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5286..5987)
-----------------
DNA (702bp)
protein (234aa)
Bll6480 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89G65_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KFC67067.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3024_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5984..6898)
-----------------
DNA (915bp)
protein (305aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003674882
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:KFC67066.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Phenazine biosynthesis protein PhzF family; K06998
scnpilot_solids2_trim150_scaffold_3024_7
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7088..7405
-----------------
DNA (318bp)
protein (106aa)
Helix-hairpin-helix DNA-binding motif-containing protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CF14_9RHIZ
Helix-hairpin-helix DNA-binding motif-containing protein {ECO:0000313|EMBL:EIZ82577.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3024_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7489..7935)
-----------------
DNA (447bp)
protein (149aa)
ABC transporter periplasmic binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I644_AZOC5
NMT1/THI5 like domain protein {ECO:0000313|EMBL:KFC67062.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
Displaying 8 items

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