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scnpilot_solids2_trim150_scaffold_3029

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3029_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..98)
-----------------
DNA (96bp)
protein (32aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Serine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGQ0_9GAMM
scnpilot_solids2_trim150_scaffold_3029_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(241..819)
-----------------
DNA (579bp)
protein (193aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89278.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3029_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(897..2252)
-----------------
DNA (1356bp)
protein (452aa)
Recombination factor protein RarA n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB6_9GAMM
Recombination factor protein RarA {ECO:0000313|EMBL:EIL95276.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
recombination factor protein RarA; K07478 putative ATPase
scnpilot_solids2_trim150_scaffold_3029_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2427..5453
-----------------
DNA (3027bp)
protein (1009aa)
Diguanylate cyclase with beta propeller sensor n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB5_9GAMM
diguanylate cyclase (GGDEF) domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG89279.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3029_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5464..6156)
-----------------
DNA (693bp)
protein (231aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0K4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92995.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3029_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6163..6828)
-----------------
DNA (666bp)
protein (222aa)
Lipoprotein chaperone n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDN2_9GAMM rbh
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
periplasmic chaperone LolA rbh
scnpilot_solids2_trim150_scaffold_3029_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6953..7921)
-----------------
DNA (969bp)
protein (323aa)
DNA segregation ATPase, FtsK/SpoIIIE family n=1 Tax=Rhodanobacter denitrificans RepID=M4NER4_9GAMM
DNA segregation ATPase, FtsK/SpoIIIE family
DNA segregation ATPase, FtsK/SpoIIIE family {ECO:0000313|EMBL:AGG89289.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 7 items

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