ggKbase home page

scnpilot_solids2_trim150_scaffold_3036

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3036_1
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..648
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PP59_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AJP47702.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3036_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

645..1520
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PP60_9ZZZZ rbh
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_3036_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1611..2051
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037CB7BA
XRE family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_3036_4
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2434..3519
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121E3_POLSJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE46849.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
scnpilot_solids2_trim150_scaffold_3036_5
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3571..5334
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121E4_POLSJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE46848.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
scnpilot_solids2_trim150_scaffold_3036_6
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5382..5900
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A979_ALKEH
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
scnpilot_solids2_trim150_scaffold_3036_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6167..7027
DNA (861bp) protein (287aa)
Putative uncharacterized protein id=1361659 bin=GWE1_T_denit_62_9 species=Xanthomonas fuscans genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_3036_8
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7009..8481
DNA (1473bp) protein (491aa)
Putative uncharacterized protein (Fragment) id=1361660 bin=GWE1_T_denit_62_9 species=Ricinus communis genus=Ricinus taxon_order=Malpighiales taxon_class=unknown phylum=Streptophyta tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein rbh
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
scnpilot_solids2_trim150_scaffold_3036_9
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8478..9158
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW9_9GAMM
hypothetical protein
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
scnpilot_solids2_trim150_scaffold_3036_10
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9155..12601
DNA (3447bp) protein (1149aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWA8_PSEUU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
scnpilot_solids2_trim150_scaffold_3036_11
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12609..13781
DNA (1173bp) protein (391aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=I6RM05_PSEAI rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
scnpilot_solids2_trim150_scaffold_3036_12
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14069..14608)
DNA (540bp) protein (180aa)
GCN5-related N-acetyltransferase n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21F33_SACD2
gcn5-related n-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABD82696.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
scnpilot_solids2_trim150_scaffold_3036_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14614..15111)
DNA (498bp) protein (166aa)
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Dihydrofolate reductase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1A6_HALNC
scnpilot_solids2_trim150_scaffold_3036_14
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15116..15571)
DNA (456bp) protein (152aa)
Thioesterase domain protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MFQ6_RHISN
thioesterase domain protein
Tax=GWA2_Curvibacter_64_110_curated
scnpilot_solids2_trim150_scaffold_3036_15
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15934..16485)
DNA (552bp) protein (184aa)
Acetyltransferase n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BU92_9GAMM
Acetyltransferase {ECO:0000313|EMBL:ESS71449.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
acetyltransferase
scnpilot_solids2_trim150_scaffold_3036_16

Not on your lists

comp(16580..16927)
DNA (348bp) protein (116aa)
Putative glutathione-dependent formaldehyde-activating, GFA n=1 Tax=mine drainage metagenome RepID=E6PQI0_9ZZZZ
Putative glutathione-dependent formaldehyde-activating, GFA {ECO:0000313|EMBL:CBH97185.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glutathione-dependent formaldehyde-activating, GFA
scnpilot_solids2_trim150_scaffold_3036_17

Not on your lists

comp(17004..17471)
DNA (468bp) protein (156aa)
GCN5-related N-acetyltransferase n=1 Tax=mine drainage metagenome RepID=E6QDC7_9ZZZZ
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CBI05203.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
N-acetyltransferase GCN5
scnpilot_solids2_trim150_scaffold_3036_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17622..18200)
DNA (579bp) protein (193aa)
O-methyltransferase family protein C1 n=1 Tax=uncultured bacterium F41-01 RepID=I3VIP6_9BACT
O-methyltransferase family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_3036_19
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18225..18590)
DNA (366bp) protein (122aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSR4_SIDLE
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADE12000.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
scnpilot_solids2_trim150_scaffold_3036_20

Not on your lists

comp(18819..19502)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QC22_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CBI04748.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3036_21
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19671..20486)
DNA (816bp) protein (272aa)
Integrase catalytic region n=1 Tax=Burkholderia sp. H160 RepID=B5WEU4_9BURK
Integrase catalytic region {ECO:0000313|EMBL:EEA03068.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
Fis family transcriptional regulator
scnpilot_solids2_trim150_scaffold_3036_22
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20514..20831)
DNA (318bp) protein (106aa)
Putative transcriptional regulator, Fis family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q123R9_POLSJ
Fis family transcriptional regulator
Putative transcriptional regulator, Fis family {ECO:0000313|EMBL:ABE46223.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Displaying 22 items

View Taxonomy