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scnpilot_solids2_trim150_scaffold_3081

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3081_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..124
-----------------
DNA (123bp)
protein (41aa)
Protein-export membrane protein SecF n=1 Tax=Rhodanobacter denitrificans RepID=I4WNS6_9GAMM
protein translocase subunit secF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_3081_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(140..847)
-----------------
DNA (708bp)
protein (236aa)
Nucleotidyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNS7_9GAMM
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3081_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(844..1737)
-----------------
DNA (894bp)
protein (298aa)
Aminoglycoside phosphotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5F6_9GAMM
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EIL94697.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aminoglycoside phosphotransferase
scnpilot_solids2_trim150_scaffold_3081_4
unknown

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1848..1994
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3081_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2038..2472
-----------------
DNA (435bp)
protein (145aa)
FeS assembly SUF system regulator, gammaproteobacterial n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5F7_9GAMM
FeS assembly SUF system regulator, gammaproteobacterial {ECO:0000313|EMBL:EIL94698.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator, BadM/Rrf2 family
scnpilot_solids2_trim150_scaffold_3081_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2520..3995
-----------------
DNA (1476bp)
protein (492aa)
Cysteine desulfurase activator complex subunit SufB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEE6_9GAMM rbh
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:EIL97837.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Iron-regulated ABC transporter membrane component SufB rbh
scnpilot_solids2_trim150_scaffold_3081_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4113..4877
-----------------
DNA (765bp)
protein (255aa)
FeS assembly ATPase SufC n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJG5_9GAMM
FeS assembly ATPase SufC {ECO:0000313|EMBL:EIL87356.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
FeS assembly ATPase SufC
scnpilot_solids2_trim150_scaffold_3081_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4874..6175
-----------------
DNA (1302bp)
protein (434aa)
FeS assembly protein SufD n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJG6_9GAMM
FeS assembly protein SufD {ECO:0000313|EMBL:EIL87357.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Iron-regulated ABC transporter permease protein SufD
scnpilot_solids2_trim150_scaffold_3081_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6382..7656
-----------------
DNA (1275bp)
protein (425aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cysteine desulfurase-like protein, SufS subfamily (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJG7_9GAMM
scnpilot_solids2_trim150_scaffold_3081_10
unknown

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7714..7791
-----------------
DNA (78bp)
protein (26aa)

This feature has no annotations

Displaying 10 items

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