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scnpilot_solids2_trim150_scaffold_3086

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3086_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..645)
DNA (645bp) protein (215aa)
gltX; glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS {ECO:0000255|HAMAP-Rule:MF_00022};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Glutamate--tRNA ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=SYE_NITMU
scnpilot_solids2_trim150_scaffold_3086_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1246..2292)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YA00_9BACT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
scnpilot_solids2_trim150_scaffold_3086_3
unknown

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comp(2617..2853)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3086_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3148..3729)
DNA (582bp) protein (194aa)
Tax=RBG_16_Betaproteobacteria_64_18_curated
scnpilot_solids2_trim150_scaffold_3086_5
unknown

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comp(3730..3939)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3086_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4184..4357
DNA (174bp) protein (58aa)
restriction endonuclease n=1 Tax=Lamprocystis purpurea RepID=UPI00037A5D5F
type III restriction enzyme, res subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
scnpilot_solids2_trim150_scaffold_3086_7
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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4360..5781
DNA (1422bp) protein (474aa)
Putative DNA methylase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH65_9BACT
DNA methylase {ECO:0000313|EMBL:KIF34059.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
DNA methylase
scnpilot_solids2_trim150_scaffold_3086_8
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5802..7133
DNA (1332bp) protein (444aa)
Putative DNA methylase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH65_9BACT
DNA methylase {ECO:0000313|EMBL:AJP47870.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
DNA methylase
scnpilot_solids2_trim150_scaffold_3086_9
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

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7223..8509
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L3U8_MAGSM rbh
hypothetical protein rbh
Tax=CG_Mariprof_02
scnpilot_solids2_trim150_scaffold_3086_10
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

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8514..9179
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L3U9_MAGSM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABK42642.1}; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
scnpilot_solids2_trim150_scaffold_3086_11
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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9179..11269
DNA (2091bp) protein (697aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003740D4E rbh
UvrD/REP helicase rbh
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
scnpilot_solids2_trim150_scaffold_3086_12
unknown

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11369..11461
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 12 items

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