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scnpilot_solids2_trim150_scaffold_3098

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3098_1
unknown

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comp(2..115)
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3098_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(112..1284)
-----------------
DNA (1173bp)
protein (391aa)
Signal peptide protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ04_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88051.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3098_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1587..2171)
-----------------
DNA (585bp)
protein (195aa)
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV38_9GAMM
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein {ECO:0000313|EMBL:EIL91079.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein
scnpilot_solids2_trim150_scaffold_3098_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2269..3546)
-----------------
DNA (1278bp)
protein (426aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV37_9GAMM
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_3098_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3668..4051
-----------------
DNA (384bp)
protein (128aa)
diacylglycerol kinase (EC:2.7.1.107)
Diacylglycerol kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV35_9GAMM
Diacylglycerol kinase {ECO:0000313|EMBL:EIL91076.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_3098_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4106..4996
-----------------
DNA (891bp)
protein (297aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZF8_9GAMM
prolipoprotein diacylglyceryl transferase
scnpilot_solids2_trim150_scaffold_3098_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5000..5794
-----------------
DNA (795bp)
protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7Q8_9GAMM
scnpilot_solids2_trim150_scaffold_3098_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5864..6352
-----------------
DNA (489bp)
protein (163aa)
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Dihydrofolate reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBN4_9GAMM
scnpilot_solids2_trim150_scaffold_3098_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6427..7065)
-----------------
DNA (639bp)
protein (213aa)
Dephospho-CoA kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV22_9GAMM
dephospho-CoA kinase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3098_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7062..7760)
-----------------
DNA (699bp)
protein (233aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
type 4 prepilin peptidase 1 (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMA8_9GAMM
Displaying 10 items

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