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scnpilot_solids2_trim150_scaffold_3156

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3156_1
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..241
DNA (240bp) protein (80aa)
Ribose ABC transport system, ATP-binding proteinRbsA n=1 Tax=Streptomyces sp. GBA 94-10 RepID=V4IIA1_9ACTO
Ribose ABC transport system, ATP-binding proteinRbsA
Ribose ABC transport system, ATP-binding proteinRbsA {ECO:0000313|EMBL:AGI88066.1}; Sugar uptake ABC transporter ATP-binding protein {ECO:0000313|EMBL:EFE83801.2}; TaxID=457425 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus J1074.;"
scnpilot_solids2_trim150_scaffold_3156_2
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

356..826
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000376405A
Strain A contig00065, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ53986.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber.;"
protein of unknown function DUF411
scnpilot_solids2_trim150_scaffold_3156_3
Leptospira weilii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

893..1153
DNA (261bp) protein (87aa)
IS5 family transposase, orfA id=12556184 bin=CNBR_ACIDO species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:EMF79480.1}; TaxID=1088540 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira weilii serovar Topaz str. LT2116.;"
IS5 family transposase, orfA
scnpilot_solids2_trim150_scaffold_3156_4
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

1212..1526
DNA (315bp) protein (105aa)
Uncharacterized protein id=2212323 bin=GWB2_Chloroflexi_49_20 species=unknown genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
scnpilot_solids2_trim150_scaffold_3156_5
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

1565..2869
DNA (1305bp) protein (435aa)
pyridine nucleotide-disulfide oxidoreductase dimerisation region; K00383 glutathione reductase (NADPH) [EC:1.8.1.7] rbh
Putative glutathione reductase n=1 Tax=Planococcus halocryophilus Or1 RepID=M3EFT4_9BACL
Uncharacterized protein {ECO:0000313|EMBL:AIF68810.1}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
scnpilot_solids2_trim150_scaffold_3156_6
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

2929..3345
DNA (417bp) protein (139aa)
Transcriptional regulator, MerR family n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NN02_MARHT
Transcriptional regulator {ECO:0000313|EMBL:EYB66472.1}; TaxID=1476583 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
MerR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_3156_7
unknown

Not on your lists

comp(3612..4061)
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3156_8
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

4154..4354
DNA (201bp) protein (67aa)
Heavy metal transport/detoxification protein n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J3E6_DEIGD
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ABF43988.1}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
scnpilot_solids2_trim150_scaffold_3156_9
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

4351..4683
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRA7_TRURR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI15195.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_3156_10
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

4735..7245
DNA (2511bp) protein (837aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ADI15197.1}; EC=3.6.3.4 {ECO:0000313|EMBL:ADI15197.1};; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Heavy metal translocating P-type ATPase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRA9_TRURR rbh
scnpilot_solids2_trim150_scaffold_3156_11
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7366..7821
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI0003707116
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB12917.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
scnpilot_solids2_trim150_scaffold_3156_12
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7794..8864
DNA (1071bp) protein (357aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59); K00150 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) [EC:1.2.1.59] rbh
Glyceraldehyde-3-phosphate dehydrogenase id=4384285 bin=GWF2_Ignavibacteria_35_20 species=Micrococcus luteus genus=Micrococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
scnpilot_solids2_trim150_scaffold_3156_13
unknown

Not on your lists

9206..9415
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3156_14
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

9412..9666
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9Y1D5_STAC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ38211.1}; Flags: Precursor;; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
scnpilot_solids2_trim150_scaffold_3156_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

9737..12223
DNA (2487bp) protein (829aa)
Heavy metal translocating P-type ATPase id=4176208 bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
putative copper-translocating P-type ATPase
Tax=GWC2_RIF_CHLX_73_18_curated
scnpilot_solids2_trim150_scaffold_3156_16
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12276..13244
DNA (969bp) protein (323aa)
ABC-1 domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3F4_9MICO
ABC transporter {ECO:0000313|EMBL:EXJ52422.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ABC transporter; K03688 ubiquinone biosynthesis protein
scnpilot_solids2_trim150_scaffold_3156_17
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

13241..13906
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI0003600579
ABC transporter; K03688 ubiquinone biosynthesis protein
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
scnpilot_solids2_trim150_scaffold_3156_18
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13935..15341)
DNA (1407bp) protein (469aa)
Multicopper oxidase n=1 Tax=Arthrobacter sp. SJCon RepID=L8TV57_9MICC
Multicopper oxidase {ECO:0000313|EMBL:ELT45680.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
multicopper oxidase type 3
scnpilot_solids2_trim150_scaffold_3156_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15569..16498
DNA (930bp) protein (310aa)
nitrous-oxide reductase (EC:1.7.2.4); K00376 nitrous-oxide reductase [EC:1.7.2.4]
Nitrous-oxide reductase {ECO:0000313|EMBL:AEN72785.1}; EC=1.7.2.4 {ECO:0000313|EMBL:AEN72785.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
Nitrous-oxide reductase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK29_RHOMR
Displaying 19 items

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