ggKbase home page

scnpilot_solids2_trim150_scaffold_3212

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3212_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1291)
DNA (1290bp) protein (430aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W2I8_METEP rbh
Peptidoglycan-binding domain 1 {ECO:0000313|EMBL:KFC65088.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidoglycan binding domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_3212_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1340..6565
DNA (5226bp) protein (1742aa)
Alpha-2-macroglobulin domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IR24_METNO rbh
Alpha-2-macroglobulin domain protein {ECO:0000313|EMBL:KFC65086.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
alpha-2-macroglobulin domain-containing protein; K06894 rbh
scnpilot_solids2_trim150_scaffold_3212_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6567..8645
DNA (2079bp) protein (693aa)
pbpC; penicillin binding protein (EC:2.4.1.129); K05367 penicillin-binding protein 1C [EC:2.4.1.-] rbh
Penicillin binding protein n=3 Tax=Methylobacterium extorquens RepID=C5AYN1_METEA rbh
Penicillin-binding protein 1C {ECO:0000313|EMBL:KFC65085.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_3212_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8781..10016)
DNA (1236bp) protein (412aa)
Phage integrase family protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XDP6_RHIFR rbh
phage integrase family protein rbh
Phage integrase family protein {ECO:0000313|EMBL:AFL54002.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
scnpilot_solids2_trim150_scaffold_3212_5
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10013..10303)
DNA (291bp) protein (97aa)
Addiction module antidote protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NYL9_9RHIZ
Addiction module antidote protein {ECO:0000313|EMBL:EKF40156.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Addiction module antidote protein, HigA family
scnpilot_solids2_trim150_scaffold_3212_6
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10313..10594)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XEP8_9RHOB
Killer protein {ECO:0000313|EMBL:KGK99885.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
higB; Toxin HigB-1
scnpilot_solids2_trim150_scaffold_3212_7
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10659..11009)
DNA (351bp) protein (117aa)
UPI0003CDFF2E related cluster n=1 Tax=unknown RepID=UPI0003CDFF2E
Regulatory protein {ECO:0000313|EMBL:ESY02293.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3212_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11203..11394
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NQM6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF41665.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3212_9
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11391..11747
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9ABC4_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE97215.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
scnpilot_solids2_trim150_scaffold_3212_10
unknown

Not on your lists

11744..12457
DNA (714bp) protein (238aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3212_11
unknown

Not on your lists

12732..13595
DNA (864bp) protein (288aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3212_12
unknown

Not on your lists

13585..13908
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3212_13
unknown

Not on your lists

13914..14156
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3212_14
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14272..14541
DNA (270bp) protein (90aa)
UPI0003CFCAE3 related cluster n=1 Tax=unknown RepID=UPI0003CFCAE3
Resolvase {ECO:0000313|EMBL:ESZ19612.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
Resolvase domain
Displaying 14 items

View Taxonomy