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scnpilot_solids2_trim150_scaffold_3252

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3252_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..361
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMN4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00726.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3252_2
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(808..1161)
DNA (354bp) protein (118aa)
Protein containing DUF1568 n=2 Tax=mine drainage metagenome RepID=T0Y689_9ZZZZ
Transposase IS200 like family protein {ECO:0000313|EMBL:AIO23753.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia ATCC 25416.;"
hypothetical protein; K07491 putative transposase
scnpilot_solids2_trim150_scaffold_3252_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1212..2063)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWF3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91544.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3252_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2516..3052)
DNA (537bp) protein (179aa)
Putative flavodoxin n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2L8G7_BURGS
Uncharacterized protein {ECO:0000313|EMBL:AHX13249.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Putative flavodoxin
scnpilot_solids2_trim150_scaffold_3252_5
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3410..3757)
DNA (348bp) protein (116aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase; K01826 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI0003671A0D
Uncharacterized protein {ECO:0000313|EMBL:GAB57354.1}; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera nanhaiensis E407-8.;"
scnpilot_solids2_trim150_scaffold_3252_6
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3916..4437)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQ19_9GAMM rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_3252_7
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4558..5448
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WQ18_9GAMM rbh
transcriptional regulator rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_3252_8
Pelodictyon phaeoclathratiforme, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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5879..6718
DNA (840bp) protein (280aa)
Abortive infection protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SH26_PELPB
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ACF45014.1}; TaxID=324925 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1).;"
scnpilot_solids2_trim150_scaffold_3252_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7038..7625)
DNA (588bp) protein (196aa)
BLUF domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF47_9GAMM
BLUF domain-containing protein {ECO:0000313|EMBL:EIL98088.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
BLUF domain-containing protein
scnpilot_solids2_trim150_scaffold_3252_10
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8249..8521
DNA (273bp) protein (91aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VQ0_RHOFD
pyridoxamine 5'-phosphate oxidase-like protein
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding {ECO:0000313|EMBL:ABD70153.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Displaying 10 items

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