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scnpilot_solids2_trim150_scaffold_3349

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3349_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..472
DNA (471bp) protein (157aa)
RNA polymerase sigma factor RpoH n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU0_9GAMM
alternative sigma factor RpoH
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3349_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(483..1820)
DNA (1338bp) protein (446aa)
ndh; NADH dehydrogenase (EC:1.6.99.3); K03885 NADH dehydrogenase [EC:1.6.99.3]
NADH dehydrogenase (Ubiquinone) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ23_9GAMM
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:EIL89314.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_3349_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1876..3198)
DNA (1323bp) protein (441aa)
C-terminal processing peptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTB1_9GAMM
C-terminal processing peptidase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3349_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3342..3926)
DNA (585bp) protein (195aa)
Membrane-bound metallopeptidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ15_9GAMM
Membrane-bound metallopeptidase {ECO:0000313|EMBL:EIL89306.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
membrane-bound metallopeptidase
scnpilot_solids2_trim150_scaffold_3349_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4392..5165
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX81_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90587.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3349_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5266..6945
DNA (1680bp) protein (560aa)
DNA ligase B n=1 Tax=Rhodanobacter denitrificans RepID=M4NSW7_9GAMM
NAD-dependent DNA ligase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3349_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6949..7350)
DNA (402bp) protein (134aa)
UPF0225 protein UUA_01469 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTB7_9GAMM
hypothetical protein
UPF0225 protein UUA_01469 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_3349_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7388..7984)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX78_9GAMM
putative S-adenosylmethionine-dependent methyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3349_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7998..8195)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTC0_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3349_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8286..8864)
DNA (579bp) protein (193aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKH9_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3349_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8938..9492)
DNA (555bp) protein (185aa)
Histidine utilization protein HutD n=1 Tax=Rhodanobacter denitrificans RepID=I4WX75_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90581.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3349_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9489..11039)
DNA (1551bp) protein (517aa)
ATP-dependent DNA helicase DinG n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTS2_9GAMM
ATP-dependent DNA helicase DinG {ECO:0000313|EMBL:EIL90613.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA helicase, Rad3
Displaying 12 items

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