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scnpilot_solids2_trim150_scaffold_3406

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3406_1
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..493
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000380063C
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:ADZ77574.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_3406_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(552..1256)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000370986A
AraC family transcriptional regulator {ECO:0000313|EMBL:AHX14133.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
transcriptional regulator transcription regulator protein
scnpilot_solids2_trim150_scaffold_3406_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1357..2304
DNA (948bp) protein (316aa)
hypothetical protein; K01777 proline racemase [EC:5.1.1.4]
hydroxyproline-2-epimerase n=1 Tax=Xanthomonas sacchari RepID=UPI00026309F2
Proline racemase {ECO:0000313|EMBL:EIL92432.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_3406_4
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2301..3398
DNA (1098bp) protein (366aa)
D-amino acid oxidase n=1 Tax=Xanthomonas arboricola RepID=UPI0002E4EF3A
D-amino acid oxidase {ECO:0000313|EMBL:KHL59533.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
D-amino acid oxidase
scnpilot_solids2_trim150_scaffold_3406_5
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3395..3640
DNA (246bp) protein (82aa)
sarcosine oxidase alpha subunit; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
Uncharacterized protein n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RRL9_XANCB
Sarcosine oxidase alpha subunit {ECO:0000313|EMBL:AAM41691.1}; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 /; NCPPB 528 / LMG 568 / P 25).;"
scnpilot_solids2_trim150_scaffold_3406_6
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3633..4898
DNA (1266bp) protein (422aa)
oxidoreductase n=1 Tax=Xanthomonas arboricola RepID=UPI0002D2796A
Oxidoreductase {ECO:0000313|EMBL:KER84062.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
oxidoreductase
scnpilot_solids2_trim150_scaffold_3406_7
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4944..5819
DNA (876bp) protein (292aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. JCM 18903.;"
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
Dihydrodipicolinate synthetase n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QBF5_PSYCK
scnpilot_solids2_trim150_scaffold_3406_8
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5816..7432
DNA (1617bp) protein (539aa)
hypothetical protein; K09472 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase [EC:1.2.1.-]
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GWN8_PUSST
Uncharacterized protein {ECO:0000313|EMBL:AEC18911.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids2_trim150_scaffold_3406_9
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7429..8901
DNA (1473bp) protein (491aa)
Outer membrane receptor for ferrienterochelin and colicin n=1 Tax=Novosphingobium sp. AP12 RepID=J3A949_9SPHN
Outer membrane receptor for ferrienterochelin and colicin {ECO:0000313|EMBL:EJL27769.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
TonB-dependent receptor
Displaying 9 items

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