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scnpilot_solids2_trim150_scaffold_3445

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3445_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..603
DNA (603bp) protein (201aa)
Conserved hypothetical integral membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVY2_9GAMM
hypothetical protein
Conserved hypothetical integral membrane protein {ECO:0000313|EMBL:AGG90422.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3445_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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638..1384
DNA (747bp) protein (249aa)
ABC-type transport system involved in resistance to organic solvents, periplasmic component n=1 Tax=Rhodanobacter denitrificans RepID=I4WVY1_9GAMM
ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABC-type transport system involved in resistance to organic solvents, periplasmic component {ECO:0000313|EMBL:AGG90421.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3445_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1436..2110
DNA (675bp) protein (225aa)
ABC-type transport system involved in resistance to organic solvents, auxiliary component n=1 Tax=Rhodanobacter denitrificans RepID=I4WVY0_9GAMM rbh
ABC-type transport system involved in resistance to organic solvents, auxiliary component rbh
ABC-type transport system involved in resistance to organic solvents, auxiliary component {ECO:0000313|EMBL:AGG90420.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3445_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2107..2415
DNA (309bp) protein (103aa)
Putative NTP binding protein (Contains STAS domain) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNH9_9GAMM
Putative NTP binding protein (Contains STAS domain) {ECO:0000313|EMBL:EIM01021.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative NTP binding protein (contains STAS domain)
scnpilot_solids2_trim150_scaffold_3445_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2486..3124)
DNA (639bp) protein (213aa)
Surface lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX8_9GAMM
surface lipoprotein
Surface lipoprotein {ECO:0000313|EMBL:AGG90418.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3445_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3444..3734
DNA (291bp) protein (97aa)
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
DNA-directed RNA polymerase subunit omega n=3 Tax=Rhodanobacter RepID=I4WVX7_9GAMM
scnpilot_solids2_trim150_scaffold_3445_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3861..6026
DNA (2166bp) protein (722aa)
RelA/SpoT family (P)ppGpp synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNH6_9GAMM rbh
RelA/SpoT family (P)ppGpp synthetase {ECO:0000313|EMBL:EIM01018.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
(p)ppGpp synthetase, RelA/SpoT family
scnpilot_solids2_trim150_scaffold_3445_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6101..6484
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX5_9GAMM
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AGG90415.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3445_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6567..8684
DNA (2118bp) protein (706aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:AGG90414.1}; EC=3.6.1.- {ECO:0000313|EMBL:AGG90414.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ATP-dependent DNA helicase RecG (EC:3.6.1.-) rbh
ATP-dependent DNA helicase RecG n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX4_9GAMM rbh
scnpilot_solids2_trim150_scaffold_3445_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8736..9671
DNA (936bp) protein (312aa)
Inosine-uridine nucleoside N-ribohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NL66_9GAMM rbh
Inosine-uridine nucleoside N-ribohydrolase rbh
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:AGG90413.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3445_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9741..10010
DNA (270bp) protein (90aa)
50S ribosomal protein L31 type B n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX2_9GAMM
ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3445_12
unknown

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10146..10223
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 12 items

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