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scnpilot_solids2_trim150_scaffold_3590

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3590_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..425)
DNA (423bp) protein (141aa)
Glutathionylspermidine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHI5_9GAMM
glutathionylspermidine synthase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3590_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(425..988)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2W2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93803.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative integral membrane protein
scnpilot_solids2_trim150_scaffold_3590_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1181..2125)
DNA (945bp) protein (315aa)
Serine/threonine protein kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHI3_9GAMM
Serine/threonine protein kinase {ECO:0000313|EMBL:EIL98924.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative homoserine kinase type II (protein kinase fold)
scnpilot_solids2_trim150_scaffold_3590_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2122..2562)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCL1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87497.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3590_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2617..3684
DNA (1068bp) protein (356aa)
2-polyprenylphenol hydroxylase-like oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDJ2_9GAMM
2-polyprenylphenol hydroxylase-like oxidoreductase
2-polyprenylphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:AGG87498.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3590_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3749..4195)
DNA (447bp) protein (149aa)
Rhodanese-related sulfurtransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHI0_9GAMM
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:EIL98921.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Rhodanese-related sulfurtransferase
scnpilot_solids2_trim150_scaffold_3590_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4273..4686)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHH9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98920.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3590_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4744..5217)
DNA (474bp) protein (158aa)
Thioesterase domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHH8_9GAMM
Thioesterase domain-containing protein {ECO:0000313|EMBL:EIL98919.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
thioesterase-like protein
scnpilot_solids2_trim150_scaffold_3590_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5307..6077
DNA (771bp) protein (257aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EIL98918.1}; EC=4.2.1.75 {ECO:0000313|EMBL:EIL98918.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Uroporphyrinogen-III synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHH7_9GAMM
uroporphyrinogen-III synthase
scnpilot_solids2_trim150_scaffold_3590_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6722..7183
DNA (462bp) protein (154aa)
Putative enzyme of heme biosynthesis n=2 Tax=Rhodanobacter denitrificans RepID=M4NDJ5_9GAMM
putative enzyme of heme biosynthesis
Putative enzyme of heme biosynthesis {ECO:0000313|EMBL:AGG87503.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3590_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7180..8436
DNA (1257bp) protein (419aa)
Putative enzyme of heme biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=I4WHK2_9GAMM
putative enzyme of heme biosynthesis
Putative enzyme of heme biosynthesis {ECO:0000313|EMBL:AGG87504.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3590_12
unknown

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8583..8948
DNA (366bp) protein (122aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3590_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9084..10103
DNA (1020bp) protein (340aa)
Alpha/beta hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAT3_9GAMM
Alpha/beta hydrolase {ECO:0000313|EMBL:EIL96574.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_solids2_trim150_scaffold_3590_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10107..10403)
DNA (297bp) protein (99aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA-dependent helicase II n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAT4_9GAMM
DNA/RNA helicase, superfamily I
scnpilot_solids2_trim150_scaffold_3590_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10355..12274)
DNA (1920bp) protein (640aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA-dependent helicase II n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V2_9GAMM
DNA/RNA helicase, superfamily I
scnpilot_solids2_trim150_scaffold_3590_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12350..12568)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAT5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIL96576.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_3590_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12751..15117)
DNA (2367bp) protein (789aa)
DNA polymerase I {ECO:0000313|EMBL:AGG87508.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AGG87508.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Rhodanobacter denitrificans RepID=M4NDJ8_9GAMM
Displaying 17 items

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