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scnpilot_solids2_trim150_scaffold_3792

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3792_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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124..570
DNA (447bp) protein (149aa)
GatB-Yqey n=1 Tax=Rhodanobacter denitrificans RepID=I4WHW6_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3792_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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654..824
DNA (171bp) protein (57aa)
UPF0391 membrane protein UUC_16285 n=1 Tax=Rhodanobacter denitrificans RepID=I4WHW8_9GAMM
Protein of unknown function (DUF1328)
UPF0391 membrane protein R2APBS1_0290 {ECO:0000256|HAMAP-Rule:MF_01361}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3792_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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923..2587
DNA (1665bp) protein (555aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W300_9GAMM
scnpilot_solids2_trim150_scaffold_3792_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2670..3338
DNA (669bp) protein (223aa)
DedA protein family n=1 Tax=Rhodanobacter denitrificans RepID=I4WHX0_9GAMM
putative membrane-associated protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3792_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3458..4513
DNA (1056bp) protein (352aa)
Sodium/bile acid symporter family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ77_9GAMM
Sodium/bile acid symporter family protein {ECO:0000313|EMBL:EIL89368.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative Na+-dependent transporter
scnpilot_solids2_trim150_scaffold_3792_6
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4641..5360)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HSG7_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids2_trim150_scaffold_3792_7
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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5553..6638
DNA (1086bp) protein (362aa)
histidine kinase n=1 Tax=Nevskia ramosa RepID=UPI0003B4FF7B rbh
transmembrane sensor histidine kinase protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids2_trim150_scaffold_3792_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

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6635..7420
DNA (786bp) protein (262aa)
transcriptional regulator n=1 Tax=Nevskia ramosa RepID=UPI0003B68D10 rbh
two-component sensor protein histidine protein kinase, putative rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
scnpilot_solids2_trim150_scaffold_3792_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7476..7838)
DNA (363bp) protein (121aa)
Magnesium-transporting ATPase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ78_9GAMM
Magnesium-transporting ATPase {ECO:0000313|EMBL:EIL89369.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
magnesium-translocating P-type ATPase
Displaying 9 items

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