ggKbase home page

scnpilot_solids2_trim150_scaffold_2031

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2031_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..379
DNA (378bp) protein (126aa)
peptidase M23 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C1495
cell division protein FtsZ; K03531 cell division protein FtsZ
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_2031_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

478..1392
DNA (915bp) protein (305aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-); K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] rbh
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000255|HAMAP-Rule:MF_00388}; EC=3.5.1.- {ECO:0000255|HAMAP-Rule:MF_00388};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000255|HAMAP-Rule:MF_00388}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036ACDC1 rbh
scnpilot_solids2_trim150_scaffold_2031_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1389..1571
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369067F
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_2031_4
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1722..2006
DNA (285bp) protein (95aa)
Transcriptional regulator, XRE family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y114_LEPCP
XRE family transcriptional regulator; K07726 putative transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACB35431.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scnpilot_solids2_trim150_scaffold_2031_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2020..3294
DNA (1275bp) protein (425aa)
Phosphodiesterase transmembrane protein id=1337186 bin=GWE1_T_denit_62_9 species=Burkholderia sp. SJ98 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_2031_6
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3501..5342
DNA (1842bp) protein (614aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367495D rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO35354.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Fe2+-dicitrate sensor, membrane component
scnpilot_solids2_trim150_scaffold_2031_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5353..6816)
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371A5C3 rbh
putative GGDEF domain protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_2031_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6972..7403)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367EEBE
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_2031_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7493..10216
DNA (2724bp) protein (908aa)
Protein translocase subunit SecA id=1324219 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
protein translocase subunit SecA; K03070 preprotein translocase subunit SecA rbh
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_2031_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10226..10453
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003724E69
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_2031_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10488..10934
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F15BD
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_2031_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11448..11705
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AEA9F
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 12 items

View Taxonomy