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scnpilot_solids2_trim150_scaffold_2079

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2079_1
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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96..2003
DNA (1908bp) protein (636aa)
Restriction enzyme BgcI subunit alpha n=2 Tax=Haemophilus parasuis RepID=U4RLW9_HAEPR rbh
Restriction enzyme {ECO:0000313|EMBL:AHM59211.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
restriction enzyme rbh
scnpilot_solids2_trim150_scaffold_2079_2

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2007..2519
DNA (513bp) protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN06069.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Restriction enzyme, beta subunit id=4051858 bin=GWB1_CP_36_13 species=Streptococcus peroris genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
scnpilot_solids2_trim150_scaffold_2079_3
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2500..3039
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5LBE1_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EGL81342.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2079_4
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3278..4438
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XLJ4_LEEBM
Uncharacterized protein {ECO:0000313|EMBL:KKB53314.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2079_5
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4587..5579
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FF77_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF08894.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2079_6
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5560..5733
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTB9_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ15933.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_solids2_trim150_scaffold_2079_7
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5820..6032
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WPN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08894.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
scnpilot_solids2_trim150_scaffold_2079_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6035..7066
DNA (1032bp) protein (344aa)
Restriction endonuclease n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AC80_9FIRM rbh
Restriction endonuclease {ECO:0000313|EMBL:EDQ96213.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2079_9
unknown

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7292..7591
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2079_10
unknown

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comp(7578..7844)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2079_11
unknown

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comp(7979..8119)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2079_12
unknown

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8163..8411
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2079_13
unknown

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comp(8401..8601)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2079_14
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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9080..9301
DNA (222bp) protein (74aa)
Helix-turn-helix id=4618628 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Helix-turn-helix.
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_2079_15
R_OD1_Wolfebacteria_47_17b, Wolfebacteria, Parcubacteria, Bacteria

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9288..10295
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI00034C7D45 rbh
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_47_17b_curated
scnpilot_solids2_trim150_scaffold_2079_16
Prevotella melaninogenica, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10285..11196)
DNA (912bp) protein (304aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1401073 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella melaninogenica DNF00666.;"
putative DNA methylase N-4/N-6; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] rbh
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Prevotella sp. CAG:386 RepID=R6PS00_9BACT rbh
scnpilot_solids2_trim150_scaffold_2079_17
unknown

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11217..11399
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 17 items

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