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scnpilot_solids2_trim150_scaffold_2086

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2086_1
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84..1436)
DNA (1353bp) protein (451aa)
Integrase n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JFR1_FRASC
integrase
Integrase {ECO:0000313|EMBL:ABD09881.1}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
scnpilot_solids2_trim150_scaffold_2086_2
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1609..3186
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003607241 rbh
Transposase {ECO:0000313|EMBL:CDK00363.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_2086_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3187..3954
DNA (768bp) protein (256aa)
ATPase AAA n=1 Tax=Glaciibacter superstes RepID=UPI0003B4A3EC rbh
Putative insertion element ATP-binding protein {ECO:0000313|EMBL:CDK00364.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
insertion element ATP-binding protein
scnpilot_solids2_trim150_scaffold_2086_4
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(4215..4568)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A4X9_DEIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ68227.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
scnpilot_solids2_trim150_scaffold_2086_5
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4782..6197
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UCA3_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EXL03897.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2086_6
unknown

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6197..6412
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2086_7
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

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6405..7217
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IYB1_NOSP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC84710.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
scnpilot_solids2_trim150_scaffold_2086_8
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7481..7726
DNA (246bp) protein (82aa)
DNA binding domain, excisionase family n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7V7_OCHA4
DNA binding domain-containing protein
DNA binding domain, excisionase family {ECO:0000313|EMBL:ABS17311.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
scnpilot_solids2_trim150_scaffold_2086_9
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7975..8337
DNA (363bp) protein (121aa)
addiction module antitoxin n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B64967
plasmid maintenance system antidote protein
Plasmid maintenance system antidote protein {ECO:0000313|EMBL:BAF90645.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_2086_10
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8549..8860
DNA (312bp) protein (104aa)
transcriptional regulator n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B6BB6C
Putative transcriptional regulator {ECO:0000313|EMBL:GAB97614.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
scnpilot_solids2_trim150_scaffold_2086_11
unknown

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8857..9252
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2086_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(9249..9521)
DNA (273bp) protein (91aa)
Putative Transcriptional regulator, XRE family n=1 Tax=mine drainage metagenome RepID=E6Q5G7_9ZZZZ
Transcriptional regulator {ECO:0000313|EMBL:AIE85260.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
helix-turn-helix domain-containing DNA-binding protein
scnpilot_solids2_trim150_scaffold_2086_13
unknown

Not on your lists

comp(9557..9790)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2086_14
unknown

Not on your lists

comp(9884..10093)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2086_15
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10102..10599)
DNA (498bp) protein (166aa)
Transposase n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9F571_9CYAN
Transposase {ECO:0000313|EMBL:EKU96645.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
transposase IS4 family protein
scnpilot_solids2_trim150_scaffold_2086_16
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

10769..11191
DNA (423bp) protein (141aa)
Putative transcriptional regulator, MerR family n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1D415_DEIDV
Transcriptional regulator {ECO:0000313|EMBL:EYB66472.1}; TaxID=1476583 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
MerR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2086_17
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

11226..11429
DNA (204bp) protein (68aa)
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1]
Mercuric reductase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SG39_9BACT
Displaying 17 items

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