ggKbase home page

scnpilot_solids2_trim150_scaffold_2108

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2108_1
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..642
DNA (642bp) protein (214aa)
Uncharacterized protein {ECO:0000313|EMBL:KDP94951.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
scnpilot_solids2_trim150_scaffold_2108_2
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

639..3482
DNA (2844bp) protein (948aa)
DNA methylase N-4/N-6 (EC:2.1.1.72); K00571 site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KXS4_9BURK rbh
DNA methylase N-4/N-6 domain-containing protein {ECO:0000313|EMBL:EGI75349.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
scnpilot_solids2_trim150_scaffold_2108_3
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3487..4704
DNA (1218bp) protein (406aa)
Uncharacterized protein n=2 Tax=Methylobacterium extorquens RepID=C5B676_METEA
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ45808.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2108_4
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4701..6800
DNA (2100bp) protein (700aa)
UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S3P6_9RHOB rbh
UvrD/REP helicase
Tax=BJP_IG2158_Rhodobacterales_64_37
scnpilot_solids2_trim150_scaffold_2108_trna_1
unknown

Not on your lists

7017..7103
DNA (87bp)
transferRNA Ser
scnpilot_solids2_trim150_scaffold_2108_5
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7797..8009
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4Q5_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27168.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids2_trim150_scaffold_2108_6
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8006..8518
DNA (513bp) protein (171aa)
Transcriptional regulator, XRE family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4Q6_NOVAD
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABD27167.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids2_trim150_scaffold_2108_7
unknown

Not on your lists

comp(8661..8933)
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2108_8
unknown

Not on your lists

comp(9002..9211)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2108_9
unknown

Not on your lists

9273..9509
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00036CEF27
scnpilot_solids2_trim150_scaffold_2108_10
unknown

Not on your lists

comp(9525..9992)
DNA (468bp) protein (156aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2108_11
unknown

Not on your lists

comp(9989..10420)
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2108_12
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10420..11319)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003629E5F
Putative uncharacterized protein {ECO:0000313|EMBL:EHK77689.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
Displaying 13 items

View Taxonomy