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scnpilot_solids2_trim150_scaffold_2139

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2139_1
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..298)
DNA (297bp) protein (99aa)
FAD dependent oxidoreductase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2Z6_STAND
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KJB97379.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
FAD dependent oxidoreductase
scnpilot_solids2_trim150_scaffold_2139_2
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(288..1058)
DNA (771bp) protein (257aa)
ABC transporter related protein n=1 Tax=Pseudomonas sp. CFII64 RepID=S6HC98_9PSED rbh
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFE55145.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.;"
amino acid ABC transporter ATP-binding protein
scnpilot_solids2_trim150_scaffold_2139_3
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1055..2554)
DNA (1500bp) protein (500aa)
argH1; argininosuccinate lyase ArgH (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] rbh
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
Argininosuccinate lyase n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0EVJ5_CUPNN rbh
scnpilot_solids2_trim150_scaffold_2139_4
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2592..3308)
DNA (717bp) protein (239aa)
Putative amino acid ABC transporter permease protein n=1 Tax=Pseudomonas sp. CFII64 RepID=S6H5P9_9PSED
Amino acid ABC transporter permease {ECO:0000313|EMBL:KFE55144.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.;"
amino acid ABC transporter permease
scnpilot_solids2_trim150_scaffold_2139_5
Pseudomonas psychrotolerans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3316..3978)
DNA (663bp) protein (221aa)
Putative ABC amino acid transporter permease/substrate-binding protein n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JHD7_9PSED rbh
Putative ABC amino acid transporter permease/substrate-binding protein {ECO:0000313|EMBL:EHK69406.1}; TaxID=1112217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas psychrotolerans L19.;"
ABC amino acid transporter permease/substrate-binding protein
scnpilot_solids2_trim150_scaffold_2139_6
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4043..4381)
DNA (339bp) protein (113aa)
Putative amino acid ABC transporter periplasmic solute-binding protein n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6CTC5_PSEST
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHG65107.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
putative amino acid ABC transporter periplasmic solute-binding protein; K02030 polar amino acid transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_2139_7
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4324..4746)
DNA (423bp) protein (141aa)
Bacterial extracellular solute-binding s, 3 family protein n=1 Tax=Pseudomonas putida S610 RepID=V6J9I7_PSEPU
Bacterial extracellular solute-binding s, 3 family protein {ECO:0000313|EMBL:EST15866.1}; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;"
amino acid ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_2139_8
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4718..5941)
DNA (1224bp) protein (408aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01733 threonine synthase [EC:4.2.3.1]
Threonine synthase n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UEX9_ALCXX
Threonine synthase {ECO:0000313|EMBL:EFV82497.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
scnpilot_solids2_trim150_scaffold_2139_9
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6022..6975
DNA (954bp) protein (318aa)
LysR family transcriptional regulator n=1 Tax=Burkholderia kururiensis RepID=UPI000368B4BE
Transcriptional regulator LysR family {ECO:0000313|EMBL:AJK50179.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
LysR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2139_10
unknown

Not on your lists

comp(7062..7409)
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2139_11
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7757..8254
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JDK6_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07853.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_2139_12
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8283..8504)
DNA (222bp) protein (74aa)
DNA gyrase inhibitor YacG n=1 Tax=Xanthobacteraceae RepID=UPI00036068E8
hypothetical protein; K09862 hypothetical protein
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_2139_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8501..9139)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030A1A62
Maf-like protein FG93_05357 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Maf-like protein; K06287 septum formation protein
scnpilot_solids2_trim150_scaffold_2139_14
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9205..9423)
DNA (219bp) protein (73aa)
translation initiation factor IF-1 n=1 Tax=Ahrensia kielensis RepID=UPI00035E1870
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
scnpilot_solids2_trim150_scaffold_2139_15
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9822..10580
DNA (759bp) protein (253aa)
Transcriptional regulator, GntR family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJU9_9PROT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFH12412.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2139_16
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10641..11138
DNA (498bp) protein (166aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TGA9_BURPP
hypothetical protein
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:ACD20081.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
Displaying 16 items

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