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scnpilot_solids2_trim150_scaffold_2178

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2178_1
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1..672)
DNA (672bp) protein (224aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Algoriphagus machipongonensis RepID=A3HZ41_9BACT
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EAZ80527.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
metallophosphoesterase
scnpilot_solids2_trim150_scaffold_2178_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1126..1632
DNA (507bp) protein (169aa)
Outer membrane transport energization protein ExbD n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRW6_NIAKG
Putative ExbD/TolR family membrane protein {ECO:0000313|EMBL:GAO41471.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
outer membrane transport energization protein ExbD
scnpilot_solids2_trim150_scaffold_2178_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2054..2878)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIS9_CHIPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU58268.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_2178_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2886..3770)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIT2_CHIPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU58271.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_2178_5
unknown

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comp(3840..4856)
DNA (1017bp) protein (339aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2178_6
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4884..5105)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TBC9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE03756.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_2178_7
unknown

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5381..5692
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2178_8
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5770..6948)
DNA (1179bp) protein (393aa)
Integrase family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5N1_9SPHI rbh
Integrase rbh
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
scnpilot_solids2_trim150_scaffold_2178_9
CG_Moran_01, Moranbacteria, Parcubacteria, Bacteria

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7637..9004
DNA (1368bp) protein (456aa)
outer membrane protein id=5100250 bin=WS6_GWC1_33_20 species=WS6_GWF1_33_233 genus=WS6_GWF1_33_233 taxon_order=WS6_GWF1_33_233 taxon_class=WS6_GWF1_33_233 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
hypothetical protein
Tax=CG_Moran_01
scnpilot_solids2_trim150_scaffold_2178_10
unknown

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comp(9076..9405)
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2178_11
unknown

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comp(9480..10133)
DNA (654bp) protein (218aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2178_12
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(10171..10866)
DNA (696bp) protein (232aa)
Site-specific recombinase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GU84_9BACT
Site-specific recombinase {ECO:0000313|EMBL:CCH57685.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
resolvase
Displaying 12 items

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