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scnpilot_solids2_trim150_scaffold_2188

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2188_1
unknown

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comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2188_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(226..636)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W393_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93934.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative integral membrane protein
scnpilot_solids2_trim150_scaffold_2188_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(791..2068)
DNA (1278bp) protein (426aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
6-phosphofructokinase (EC:2.7.1.90)
6-phosphofructokinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W392_9GAMM rbh
scnpilot_solids2_trim150_scaffold_2188_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2261..2845
DNA (585bp) protein (195aa)
adenylate kinase-like kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHQ1_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2188_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2884..4329
DNA (1446bp) protein (482aa)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W390_9GAMM rbh
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000313|EMBL:EIL93931.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
scnpilot_solids2_trim150_scaffold_2188_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4375..4983
DNA (609bp) protein (203aa)
Peptidase S16, lon domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W389_9GAMM rbh
Peptidase S16, lon domain-containing protein {ECO:0000313|EMBL:EIL93930.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
peptidase S16, lon domain protein
scnpilot_solids2_trim150_scaffold_2188_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5039..5857
DNA (819bp) protein (273aa)
Short chain dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W388_9GAMM rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EIL93929.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids2_trim150_scaffold_2188_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5964..7190
DNA (1227bp) protein (409aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Acetylornithine aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W387_9GAMM rbh
acetylornithine/succinylornithine aminotransferase
scnpilot_solids2_trim150_scaffold_2188_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7216..7635
DNA (420bp) protein (140aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W386_9GAMM
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EIL93927.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lactoylglutathione lyase-like lyase
scnpilot_solids2_trim150_scaffold_2188_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7637..8920)
DNA (1284bp) protein (428aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W385_9GAMM rbh
glutamate-1-semialdehyde-2,1-aminomutase
scnpilot_solids2_trim150_scaffold_2188_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8917..9543)
DNA (627bp) protein (209aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
Thiamine-phosphate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W384_9GAMM rbh
thiamine-phosphate pyrophosphorylase
scnpilot_solids2_trim150_scaffold_2188_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9669..9863
DNA (195bp) protein (65aa)
Rubredoxin n=1 Tax=Rhodanobacter denitrificans RepID=M4NCQ0_9GAMM
rubredoxin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2188_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9971..10177
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHR1_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2188_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10081..10581)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W382_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93923.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
Displaying 14 items

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