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scnpilot_solids2_trim150_scaffold_2206

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2206_1
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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121..768
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X008_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS14562.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
scnpilot_solids2_trim150_scaffold_2206_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(769..1476)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003785086
Uncharacterized protein {ECO:0000313|EMBL:CDX18158.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
scnpilot_solids2_trim150_scaffold_2206_3
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1487..2011)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XJR9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ERI15185.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2206_4
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2109..2357
DNA (249bp) protein (83aa)
Transcriptional regulator n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YWY4_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:ERI15186.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
helix-turn-helix domain-containing protein
scnpilot_solids2_trim150_scaffold_2206_5
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2514..3320
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI00037B825D rbh
Uncharacterized protein {ECO:0000313|EMBL:CCM76732.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2206_trna_1
unknown

Not on your lists

3617..3685
DNA (69bp)
transferRNA Val
scnpilot_solids2_trim150_scaffold_2206_6
Triticum urartu, Triticum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(3759..4004)
DNA (246bp) protein (82aa)
Uncharacterized protein (Fragment) n=1 Tax=Triticum urartu RepID=T1ME26_TRIUA
Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_15926-P1}; TaxID=4572 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum.;" source="Triticum urartu (Red wild einkorn) (Crithodium urartu).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2206_7
bacterium YEK0313, Bacteria

Not on your lists

4169..5377
DNA (1209bp) protein (403aa)
pcaF; beta-ketoadipyl CoA thiolase; K07823 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] rbh
acetyl-CoA acetyltransferase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036F54BF rbh
Beta-ketoadipyl-CoA thiolase {ECO:0000313|EMBL:CEJ11514.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_2206_8
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5542..5667
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7D4_STAND
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_2206_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5741..6322
DNA (582bp) protein (194aa)
TPR domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JC00_OLICO
TPR domain-containing protein
TPR domain protein {ECO:0000313|EMBL:AEI07573.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_2206_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6475..7890)
DNA (1416bp) protein (472aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E95F29 rbh
scnpilot_solids2_trim150_scaffold_2206_11
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7890..8348)
DNA (459bp) protein (153aa)
Putative integral membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTP1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG67841.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2206_12
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8348..9664)
DNA (1317bp) protein (439aa)
hydroxypyruvate reductase; K00050 hydroxypyruvate reductase [EC:1.1.1.81] rbh
Hydroxypyruvate reductase {ECO:0000313|EMBL:ACA19530.1}; EC=1.1.1.81 {ECO:0000313|EMBL:ACA19530.1};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030674DE rbh
scnpilot_solids2_trim150_scaffold_2206_13
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9799..10110
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M6B6_METRJ
Protein of unassigned function {ECO:0000313|EMBL:AIQ87882.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
hypothetical protein; K09948 hypothetical protein
scnpilot_solids2_trim150_scaffold_2206_14
bacterium YEK0313, Bacteria

Not on your lists

10219..10485
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003717A90
Uncharacterized protein {ECO:0000313|EMBL:CEJ14241.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2206_15
unknown

Not on your lists

comp(10501..10884)
DNA (384bp) protein (128aa)

This feature has no annotations

Displaying 16 items

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