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scnpilot_solids2_trim150_scaffold_2401

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2401_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..205
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI000380E43D
Putative conjugal transfer protein trbI {ECO:0000313|EMBL:KJX85224.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
trbI; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10
scnpilot_solids2_trim150_scaffold_2401_2
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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171..989
DNA (819bp) protein (273aa)
TrbJ n=1 Tax=Bordetella pertussis RepID=Q08KZ3_BORPT
TrbJ {ECO:0000313|EMBL:BAF33465.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
conjugal transfer protein TrbJ
scnpilot_solids2_trim150_scaffold_2401_3
unknown

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999..1208
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2401_4

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1250..2536
DNA (1287bp) protein (429aa)
Mating pair formation protein n=1 Tax=uncultured bacterium RepID=J9R8T0_9BACT
Mating pair formation protein {ECO:0000313|EMBL:AFR44387.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conjugal transfer protein; K07344 type IV secretion system protein TrbL rbh
scnpilot_solids2_trim150_scaffold_2401_5
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2552..3004
DNA (453bp) protein (151aa)
TrbN n=1 Tax=Sphingomonas sp. A1 RepID=Q4AC42_9SPHN
transglycosylase SLT domain-containing protein 6
Mating pair formation protein {ECO:0000313|EMBL:AFR44208.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
scnpilot_solids2_trim150_scaffold_2401_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3589..4440
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Haemophilus parasuis 12939 RepID=U4S5X7_HAEPR rbh
Uncharacterized protein {ECO:0000313|EMBL:EVT87459.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA09.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2401_7
Eikenella corrodens, Eikenella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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4437..6593
DNA (2157bp) protein (719aa)
Helicase C-terminal domain protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DYQ3_EIKCO rbh
Helicase C-terminal domain protein {ECO:0000313|EMBL:EEG22864.1}; TaxID=546274 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Eikenella.;" source="Eikenella corrodens ATCC 23834.;"
helicase rbh
scnpilot_solids2_trim150_scaffold_2401_8
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6660..7346)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UD30_9GAMM
hypothetical protein
Tax=RBG_16_Alphaproteobacteria_64_48_curated
scnpilot_solids2_trim150_scaffold_2401_9
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7578..7880
DNA (303bp) protein (101aa)
transposase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037C149A
Transposase {ECO:0000313|EMBL:KDR37891.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
transposase
scnpilot_solids2_trim150_scaffold_2401_10
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7877..8707
DNA (831bp) protein (277aa)
Transposase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NBQ6_DESSD rbh
transposase rbh
Transposase {ECO:0000313|EMBL:AGF77244.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
scnpilot_solids2_trim150_scaffold_2401_11
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8802..9611)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3BX69_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB95885.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2401_12
unknown

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9814..9978
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 12 items

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