ggKbase home page

scnpilot_solids2_trim150_scaffold_2450

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2450_1

Not on your lists

comp(2..151)
DNA (150bp) protein (50aa)
copA; copper-transporting ATPase CopA (EC:3.6.3.4)
Copper-transporting ATPase CopA n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASF3_METEA
Uncharacterized protein {ECO:0000313|EMBL:KKL46822.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_2450_2
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(491..847)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2L7S3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKF06331.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
hypothetical protein; K06196 cytochrome c-type biogenesis protein
scnpilot_solids2_trim150_scaffold_2450_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(933..1151)
DNA (219bp) protein (73aa)
Cation translocating P-type ATPase n=2 Tax=Oligotropha carboxidovorans RepID=B6JKB2_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig140, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53550.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
cation translocating P-type ATPase
scnpilot_solids2_trim150_scaffold_2450_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1148..1603)
DNA (456bp) protein (152aa)
MerR family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2JBF3_9PROT
MerR family transcriptional regulator {ECO:0000313|EMBL:EKE67944.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
cueR; DNA-binding transcriptional activator of copper-responsive regulon genes
scnpilot_solids2_trim150_scaffold_2450_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1661..2371)
DNA (711bp) protein (237aa)
macB; macrolide export ATP-binding/permease MacB; K05685 macrolide transport system ATP-binding/permease protein [EC:3.6.3.-]
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036126B2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
scnpilot_solids2_trim150_scaffold_2450_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2364..3626)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003627905
hypothetical protein; K02004 putative ABC transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
scnpilot_solids2_trim150_scaffold_2450_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3636..4829)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000365F58B
hypothetical protein; K02004 putative ABC transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
scnpilot_solids2_trim150_scaffold_2450_8
unknown

Not on your lists

4967..5251
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2450_9
unknown

Not on your lists

comp(5231..6403)
DNA (1173bp) protein (391aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2450_10
unknown

Not on your lists

comp(6463..6852)
DNA (390bp) protein (130aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2450_11
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7018..8274)
DNA (1257bp) protein (419aa)
Drug resistance transporter Bcr/CflA subfamily n=1 Tax=Rhizobium sp. RepID=L0NND8_RHISP rbh
Drug resistance transporter Bcr/CflA subfamily {ECO:0000313|EMBL:CCF22391.1}; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. NT-26.;"
araJ; Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein rbh
scnpilot_solids2_trim150_scaffold_2450_12
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8591..9019)
DNA (429bp) protein (143aa)
Putative transcriptional regulator, MerR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJE4_XANP2
MerR family transcriptional regulator
Putative transcriptional regulator, MerR family {ECO:0000313|EMBL:ABS68137.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids2_trim150_scaffold_2450_13
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9105..9530
DNA (426bp) protein (142aa)
mercury transporter MerT n=1 Tax=Afipia birgiae RepID=UPI0003175673
mercuric transporter MerT; K08363 mercuric ion transport protein
Mercuric transport protein MerT {ECO:0000313|EMBL:ABS68138.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids2_trim150_scaffold_2450_14
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9555..9758
DNA (204bp) protein (68aa)
Mercuric transport protein periplasmic component n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJE6_XANP2
mercuric transport protein periplasmic component; K08364 periplasmic mercuric ion binding protein
Mercuric transport protein periplasmic component {ECO:0000313|EMBL:ABS68139.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying 14 items

View Taxonomy