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scnpilot_solids2_trim150_scaffold_2452

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2452_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..724
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SRC9_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05162.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
scnpilot_solids2_trim150_scaffold_2452_2
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(674..1045)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DBEEAB
PilT domain-containing protein; K07062
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_solids2_trim150_scaffold_2452_3
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1042..1233)
DNA (192bp) protein (64aa)
Antitoxin n=1 Tax=Thauera terpenica 58Eu RepID=S9ZAD2_9RHOO
Antitoxin {ECO:0000313|EMBL:KFG70611.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2452_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1559..4573
DNA (3015bp) protein (1005aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E97F2B rbh
tig; trigger factor; K03545 trigger factor rbh
scnpilot_solids2_trim150_scaffold_2452_trna_1
unknown

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2966..3047
DNA (82bp)
transferRNA Leu
scnpilot_solids2_trim150_scaffold_2452_5
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4804..5433
DNA (630bp) protein (210aa)
clpP; ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] rbh
ATP-dependent Clp protease proteolytic subunit {ECO:0000255|HAMAP-Rule:MF_00444}; EC=3.4.21.92 {ECO:0000255|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000255|HAMAP-Rule:MF_00444}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FA2CB8 rbh
scnpilot_solids2_trim150_scaffold_2452_6
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5663..6925
DNA (1263bp) protein (421aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QFB8_METSZ rbh
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
scnpilot_solids2_trim150_scaffold_2452_7
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7130..9562
DNA (2433bp) protein (811aa)
ATP-dependent protease La; K01338 ATP-dependent Lon protease [EC:3.4.21.53] rbh
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
Lon protease n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1Z9C9_METPB rbh
scnpilot_solids2_trim150_scaffold_2452_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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9720..9995
DNA (276bp) protein (92aa)
transcriptional regulator n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036FE7D8
Histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta
Histone-like DNA-binding protein {ECO:0000313|EMBL:ADZ70491.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_2452_trna_2
unknown

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10137..10210
DNA (74bp)
transferRNA Val
scnpilot_solids2_trim150_scaffold_2452_9
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10231..10917
DNA (687bp) protein (229aa)
Periplasmic protein-like protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q3R8_METSZ
periplasmic protein-like protein
Periplasmic protein-like protein {ECO:0000313|EMBL:CCJ06224.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
scnpilot_solids2_trim150_scaffold_2452_trna_3
unknown

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11067..11140
DNA (74bp)
transferRNA Asp
Displaying 12 items

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