ggKbase home page

scnpilot_solids2_trim150_scaffold_2453

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2453_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..158
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DNY0_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL14043.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
scnpilot_solids2_trim150_scaffold_2453_2
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155..1210
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BT38_9RHIZ rbh
Conserved domain protein {ECO:0000313|EMBL:BAR63615.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_2453_3
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1557..1943
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EWL2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EXL04916.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2453_4
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1940..2158
DNA (219bp) protein (73aa)
UPI0003CE5BD4 related cluster n=1 Tax=unknown RepID=UPI0003CE5BD4
Uncharacterized protein {ECO:0000313|EMBL:ESY90285.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
RES domain-containing protein
scnpilot_solids2_trim150_scaffold_2453_5
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2120..3586)
DNA (1467bp) protein (489aa)
Transposase n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EBA4_METSZ rbh
Transposase {ECO:0000313|EMBL:CCD32260.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2453_6
unknown

Not on your lists

3712..3981
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2453_7
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4076..4420)
DNA (345bp) protein (115aa)
UPI0003CEBDF6 related cluster n=1 Tax=unknown RepID=UPI0003CEBDF6
Cytochrome C {ECO:0000313|EMBL:ESY68596.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
cytochrome c, class I
scnpilot_solids2_trim150_scaffold_2453_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4490..4621)
DNA (132bp) protein (44aa)
Cyd operon protein YbgT n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZCN3_METPB
Cyd operon protein YbgT {ECO:0000313|EMBL:CDX44563.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Cyd operon protein YbgT
scnpilot_solids2_trim150_scaffold_2453_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5049..5399)
DNA (351bp) protein (117aa)
Cytochrome d terminal oxidase, subunit II {ECO:0000313|EMBL:CDX28072.1}; EC=1.9.3.- {ECO:0000313|EMBL:CDX28072.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cydB; cytochrome d terminal oxidase, polypeptide subunit II (EC:1.9.3.-); K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
Cytochrome d oxidase subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TW40_9RHIZ
scnpilot_solids2_trim150_scaffold_2453_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5365..5754)
DNA (390bp) protein (130aa)
cydB; transmembrane cytochrome bd-II oxidase subunit II; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
Putative transmembrane cytochrome bd-II oxidase subunit II n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4B4_POLGS
Putative transmembrane cytochrome bd-II oxidase subunit II {ECO:0000313|EMBL:ADZ71056.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_2453_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5791..6141)
DNA (351bp) protein (117aa)
Cytochrome d terminal oxidase, subunit I {ECO:0000313|EMBL:CDX55174.1}; EC=1.9.3.- {ECO:0000313|EMBL:CDX55174.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Rhizobium freirei PRF 81 RepID=N6USJ1_9RHIZ
scnpilot_solids2_trim150_scaffold_2453_12
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7042..7287)
DNA (246bp) protein (82aa)
Bacterial lipocalin n=1 Tax=Acidovorax sp. CF316 RepID=J0K226_9BURK
Bacterial lipocalin {ECO:0000313|EMBL:EJE48410.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
Lipocalin family protein; K03098 outer membrane lipoprotein Blc
scnpilot_solids2_trim150_scaffold_2453_13
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7297..7515)
DNA (219bp) protein (73aa)
Membrane protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XLU6_9RHIZ
Lipocalin family protein; K03098 outer membrane lipoprotein Blc
Membrane protein {ECO:0000313|EMBL:ERI15880.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
scnpilot_solids2_trim150_scaffold_2453_14
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8544..9755
DNA (1212bp) protein (404aa)
Chaperone protein DnaK n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KMX6_RHISN
dnaK1; chaperone protein DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
Displaying 14 items

View Taxonomy