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scnpilot_solids2_trim150_scaffold_2477

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2477_trna_1
unknown

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112..185
DNA (74bp)
transferRNA Pro
scnpilot_solids2_trim150_scaffold_2477_1
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1015..1296
DNA (282bp) protein (94aa)
Transposase IS21 family n=1 Tax=Mycobacterium canettii CIPT 140070008 RepID=L0Q811_9MYCO
Transposase (fragment)
Transposase, IS21 family protein {ECO:0000313|EMBL:CCC44445.1}; TaxID=1048245 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
scnpilot_solids2_trim150_scaffold_2477_2
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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1314..1898
DNA (585bp) protein (195aa)
Integrase, catalytic region n=1 Tax=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) RepID=A1TX73_MARAV
integrase catalytic subunit; K07497 putative transposase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
scnpilot_solids2_trim150_scaffold_2477_3
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2156..3199
DNA (1044bp) protein (348aa)
Transposase n=2 Tax=Microvirga sp. WSM3557 RepID=I4Z497_9RHIZ rbh
Transposase {ECO:0000313|EMBL:CCH75423.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
transposase IS116/IS110/IS902 family protein rbh
scnpilot_solids2_trim150_scaffold_2477_4

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3455..3799
DNA (345bp) protein (115aa)
Putative IS481 family integrase n=1 Tax=Octadecabacter arcticus 238 RepID=M9RDI7_9RHOB
Marine sediment metagenome DNA, contig: S01H1_S28181 {ECO:0000313|EMBL:GAG34437.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative IS481 family integrase
scnpilot_solids2_trim150_scaffold_2477_5
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3834..4649)
DNA (816bp) protein (272aa)
Transposase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PRI5_9FIRM rbh
Transposase {ECO:0000313|EMBL:EKP95542.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
integrase catalytic subunit
scnpilot_solids2_trim150_scaffold_2477_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(4712..4990)
DNA (279bp) protein (93aa)
Transposase IS3/IS911 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUW5_RUBXD
transposase IS3/IS911; K07483 transposase
Transposase IS3/IS911 {ECO:0000313|EMBL:ABG04813.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
scnpilot_solids2_trim150_scaffold_2477_7
unknown

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5384..6046
DNA (663bp) protein (221aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2477_8
unknown

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6055..7248
DNA (1194bp) protein (398aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2477_9
unknown

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7488..7934
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2477_10
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8511..9113
DNA (603bp) protein (201aa)
DNA resolvase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LAS8_9RHIZ
DNA resolvase {ECO:0000313|EMBL:EIZ81654.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
DNA resolvase
scnpilot_solids2_trim150_scaffold_2477_11
unknown

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comp(9481..9624)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 12 items

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