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scnpilot_solids2_trim150_scaffold_2492

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2492_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..295
DNA (294bp) protein (98aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K6_9GAMM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL94047.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids2_trim150_scaffold_2492_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(369..1046)
DNA (678bp) protein (226aa)
hypothetical protein; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
Type 12 methyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZA3_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2492_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1146..1550
DNA (405bp) protein (135aa)
BadM/Rrf2 family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K4_9GAMM
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:EIL94045.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
HTH-type transcriptional regulator ywnA
scnpilot_solids2_trim150_scaffold_2492_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1540..2427
DNA (888bp) protein (296aa)
Putative pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K3_9GAMM rbh
Putative pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EIL94044.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
scnpilot_solids2_trim150_scaffold_2492_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2680..2970
DNA (291bp) protein (97aa)
Lipoate-protein ligase A n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K2_9GAMM
Lipoate-protein ligase A {ECO:0000313|EMBL:EIL94043.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2492_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2967..3743
DNA (777bp) protein (259aa)
Lipoate--protein ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K1_9GAMM rbh
Lipoate--protein ligase {ECO:0000313|EMBL:EIL94042.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lipoate-protein ligase A rbh
scnpilot_solids2_trim150_scaffold_2492_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3844..5226
DNA (1383bp) protein (461aa)
Ubiquinol-cytochrome-c reductase complex core protein I, mitochondrial precursor, putative (EC:3.4.24.64) rbh
M16 family peptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K0_9GAMM rbh
M16 family peptidase {ECO:0000313|EMBL:EIL94041.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_2492_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5235..6653
DNA (1419bp) protein (473aa)
Putative zinc protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3J9_9GAMM rbh
Putative zinc protease {ECO:0000313|EMBL:EIL94040.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
M16 family peptidase
scnpilot_solids2_trim150_scaffold_2492_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6904..7299)
DNA (396bp) protein (132aa)
Hydrolase, nudix family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3J8_9GAMM
Hydrolase, nudix family protein {ECO:0000313|EMBL:EIL94039.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hydrolase, nudix family
scnpilot_solids2_trim150_scaffold_2492_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7296..7784)
DNA (489bp) protein (163aa)
Nudix hydrolase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3J7_9GAMM rbh
Nudix hydrolase family protein {ECO:0000313|EMBL:EIL94038.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zn-finger containing NTP pyrophosphohydrolase
scnpilot_solids2_trim150_scaffold_2492_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7882..8697
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3J6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94037.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative periplasmic protein
scnpilot_solids2_trim150_scaffold_2492_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8694..9590
DNA (897bp) protein (299aa)
Penicillin amidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3J5_9GAMM
Penicillin amidase {ECO:0000313|EMBL:EIL94036.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
penicilin amidase
Displaying 12 items

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