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scnpilot_solids2_trim150_scaffold_2504

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2504_1
Pseudomonas sp. Ag1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1142)
DNA (1140bp) protein (380aa)
aminotransferase DegT n=1 Tax=Pseudomonas sp. PAMC 26793 RepID=UPI0002EDC9BD
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:EJF68433.1}; TaxID=1197727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Ag1.;"
DegT/DnrJ/EryC1/StrS aminotransferase
scnpilot_solids2_trim150_scaffold_2504_2
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1172..1555)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036CA78C
Cation/cationic drug transporter {ECO:0000313|EMBL:KEZ77951.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2504_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1552..1911)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P1P6_AZOS1
hypothetical protein; K12962 undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
Uncharacterized protein {ECO:0000313|EMBL:BAI74575.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
scnpilot_solids2_trim150_scaffold_2504_4
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2085..3248)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003616F1A rbh
Uncharacterized protein {ECO:0000313|EMBL:AIO67190.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_2504_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3529..3867
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000380B4DC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL50639.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
scnpilot_solids2_trim150_scaffold_2504_6
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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3961..4644
DNA (684bp) protein (228aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Caulobacter crescentus OR37 RepID=R0EEQ0_CAUCE rbh
Heavy metal response regulator {ECO:0000313|EMBL:KFZ89828.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
two-component response regulator; K02483 two-component system, OmpR family, response regulator
scnpilot_solids2_trim150_scaffold_2504_7
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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4652..6037
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JWW1_DESFR rbh
two-component sensor histidine kinase; putative heavy-metal sensor (Cu/Zn)
scnpilot_solids2_trim150_scaffold_2504_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6406..7554)
DNA (1149bp) protein (383aa)
nickel transporter n=1 Tax=Ochrobactrum anthropi RepID=UPI000289AB36 rbh
High-affinity nickel-transporter {ECO:0000313|EMBL:KFC64628.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
high-affinity nickel-transporter; K08970 nickel/cobalt exporter rbh
scnpilot_solids2_trim150_scaffold_2504_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7564..7839)
DNA (276bp) protein (92aa)
nickel-resistant pritein NirB n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037B5AFB
Uncharacterized protein {ECO:0000313|EMBL:KFC64627.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K07807 hypothetical protein NreA
scnpilot_solids2_trim150_scaffold_2504_10
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

8008..8826
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QU17_9BRAD
Sulfurtransferase {ECO:0000313|EMBL:KIJ79834.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
sodM; superoxide dismutase SodM-like protein
scnpilot_solids2_trim150_scaffold_2504_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8828..9556
DNA (729bp) protein (243aa)
chromate transporter n=1 Tax=Afipia birgiae RepID=UPI0002FBDFC8
Chromate ion transporter (CHR) family chromate transporter {ECO:0000313|EMBL:EKS34460.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
crpA; putative chromate transport protein; K07240 chromate transporter
Displaying 11 items

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