ggKbase home page

scnpilot_solids2_trim150_scaffold_2517

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2517_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..369)
DNA (369bp) protein (123aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
16S rRNA m(2)G-966 methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGT5_9GAMM
16S rRNA m(2)G-966 methyltransferase
scnpilot_solids2_trim150_scaffold_2517_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

450..1616
DNA (1167bp) protein (389aa)
Signal recognition particle receptor FtsY n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B9_9GAMM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal recognition particle-docking protein FtsY
scnpilot_solids2_trim150_scaffold_2517_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1606..2733
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92909.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized protein involved in outer membrane biogenesis
scnpilot_solids2_trim150_scaffold_2517_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2730..3809
DNA (1080bp) protein (360aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRW6_9GAMM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EIM02208.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_2517_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3853..4143
DNA (291bp) protein (97aa)
Probable Fe(2+)-trafficking protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKA4_9GAMM
Fe-S cluster protector protein
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2517_trna_1
unknown

Not on your lists

4211..4283
DNA (73bp)
transferRNA Phe
scnpilot_solids2_trim150_scaffold_2517_6

Not on your lists

comp(4561..4890)
DNA (330bp) protein (110aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BGP6_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP47954.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2517_7
unknown

Not on your lists

comp(5083..5730)
DNA (648bp) protein (216aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2517_8
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5941..6318)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UAZ7_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:EFV83884.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2517_9
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6463..6714)
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM54172.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
scnpilot_solids2_trim150_scaffold_2517_10
Aphanomyces astaci, Aphanomyces, Saprolegniales, Eukaryota

Not on your lists

comp(6714..6914)
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6H6_CELGA
Uncharacterized protein {ECO:0000313|EMBL:ETV83370.1}; TaxID=112090 species="Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Aphanomyces.;" source="Aphanomyces astaci.;"
cold-shock DNA-binding domain protein; K03704 cold shock protein (beta-ribbon, CspA family)
scnpilot_solids2_trim150_scaffold_2517_11
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(7145..8389)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI0003656514
Putative Phage major capsid protein, HK97 family {ECO:0000313|EMBL:CCF84131.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
phage major capsid protein
scnpilot_solids2_trim150_scaffold_2517_12
unknown

Not on your lists

comp(8558..9247)
DNA (690bp) protein (230aa)

This feature has no annotations

Displaying 13 items

View Taxonomy