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scnpilot_solids2_trim150_scaffold_2546

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2546_1
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(396..905)
DNA (510bp) protein (170aa)
DNA repair protein RadC n=1 Tax=Pandoraea sp. RB-44 RepID=V5UGD1_9BURK
DNA repair protein RadC {ECO:0000313|EMBL:AHB76813.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
DNA repair protein RadC
scnpilot_solids2_trim150_scaffold_2546_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1378..2532
DNA (1155bp) protein (385aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=U8BRT8_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:CEI17425.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_2546_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2532..4778
DNA (2247bp) protein (749aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=U8BTR1_PSEAI rbh
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:CEI17428.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
UBA/THIF-type NAD/FAD binding protein rbh
scnpilot_solids2_trim150_scaffold_2546_4
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4780..5658
DNA (879bp) protein (293aa)
Uncharacterized protein n=6 Tax=Pseudomonas aeruginosa RepID=U8BU93_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:BAO28296.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_2546_5
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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5655..6335
DNA (681bp) protein (227aa)
Uncharacterized protein n=6 Tax=Pseudomonas aeruginosa RepID=N2CRX5_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:BAO28295.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_2546_6
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6431..6778
DNA (348bp) protein (116aa)
Prophage regulatory protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XC24_DELAC
AlpA family transcriptional regulator {ECO:0000313|EMBL:KGE06277.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
Phage-like protein; K07733 prophage regulatory protein
scnpilot_solids2_trim150_scaffold_2546_7
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6795..7319)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LNC6_RALME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF08350.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
scnpilot_solids2_trim150_scaffold_2546_8
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7324..7599)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. aesculi str. 0893_23 RepID=F3DIV8_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EGH04269.1}; TaxID=629258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.;" source="Pseudomonas amygdali pv. aesculi str. 0893_23.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2546_9
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7660..8916)
DNA (1257bp) protein (419aa)
Tyrosine-based site-specific recombinase n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2TX05_PSEST rbh
Integrase {ECO:0000313|EMBL:KGE06278.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
phage integrase rbh
scnpilot_solids2_trim150_scaffold_2546_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9408..9773)
DNA (366bp) protein (122aa)
GMP synthase (glutamine-hydrolyzing) (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Rhodanobacter denitrificans RepID=I4WXN9_9GAMM
Displaying 10 items

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