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scnpilot_solids2_trim150_scaffold_2553

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2553_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..808)
DNA (807bp) protein (269aa)
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Glutamine synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU35_9GAMM
scnpilot_solids2_trim150_scaffold_2553_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(985..1863)
DNA (879bp) protein (293aa)
Ammonium transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WUQ8_9GAMM
ammonium transporter
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2553_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2234..2572)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII n=1 Tax=Rhodanobacter denitrificans RepID=I4WUQ7_9GAMM
nitrogen regulatory protein PII
Nitrogen regulatory protein PII {ECO:0000313|EMBL:AGG87262.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2553_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2598..3359)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU38_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90729.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2553_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3633..4526)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKJ7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL87738.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
pirin; K06911
scnpilot_solids2_trim150_scaffold_2553_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4672..5469
DNA (798bp) protein (266aa)
Undecaprenyl-diphosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU39_9GAMM
putative bacitracin resistance protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2553_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5481..6347
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F74300
Uncharacterized protein {ECO:0000313|EMBL:GAN44969.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2553_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6361..9189)
DNA (2829bp) protein (943aa)
TPR repeat-containing serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] rbh
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B58424 rbh
Protein kinase {ECO:0000313|EMBL:AHG88777.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids2_trim150_scaffold_2553_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9373..9939
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000381CE7C
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG88423.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ECF sigma factor family protein
scnpilot_solids2_trim150_scaffold_2553_10
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10078..13863
DNA (3786bp) protein (1262aa)
Outer membrane protein XadA n=1 Tax=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) RepID=Q2P7F5_XANOM rbh
outer membrane protein XadA rbh
Outer membrane protein XadA {ECO:0000313|EMBL:AAG01335.1}; TaxID=64187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzae.;"
scnpilot_solids2_trim150_scaffold_2553_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13987..14967)
DNA (981bp) protein (327aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WUQ4_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG87259.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2553_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15110..16393
DNA (1284bp) protein (428aa)
RND family efflux transporter, MFP subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NCU4_9GAMM
RND family efflux transporter, MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGG87258.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2553_13
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16502..17818
DNA (1317bp) protein (439aa)
Hydrophobe/amphiphile efflux pump RND family n=1 Tax=Burkholderia sp. RPE64 RepID=R4X3W2_9BURK
Transporter {ECO:0000313|EMBL:EYS92816.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
hydrophobe/amphiphile efflux pump RND family
Displaying 13 items

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