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scnpilot_solids2_trim150_scaffold_2594

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2594_1
unknown

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comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2594_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(217..1557)
DNA (1341bp) protein (447aa)
dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3] rbh
dihydroorotase n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036914C7 rbh
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_2594_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1836..2576)
DNA (741bp) protein (247aa)
Short-chain dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HRJ1_AZOC5
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:BAF87194.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_2594_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2573..3175)
DNA (603bp) protein (201aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
pdxH; pyridoxamine 5'-phosphate oxidase; K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F45184
scnpilot_solids2_trim150_scaffold_2594_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3226..3729
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E74565
Surface antigen {ECO:0000313|EMBL:EIM26124.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2594_6
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3781..4755
DNA (975bp) protein (325aa)
molecular chaperone DnaJ n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003691CA6
chaperone DnaJ domain-containing protein
Chaperone DnaJ domain protein {ECO:0000313|EMBL:CCJ06764.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
scnpilot_solids2_trim150_scaffold_2594_7
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4892..5710
DNA (819bp) protein (273aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
enoyl-ACP reductase (EC:1.3.1.10); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ84_9RHIZ rbh
scnpilot_solids2_trim150_scaffold_2594_8
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5748..6329
DNA (582bp) protein (194aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Fructose-2,6-bisphosphatase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ85_9RHIZ
Phosphoglycerate mutase {ECO:0000313|EMBL:KFG69819.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
scnpilot_solids2_trim150_scaffold_2594_9
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6542..8092
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002EDC47D rbh
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EAQ37357.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_2594_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8232..10250
DNA (2019bp) protein (673aa)
methyl-accepting chemotaxis protein n=1 Tax=Rhizobium giardinii RepID=UPI00035C38F1 rbh
Putative methyl-accepting chemotaxis protein MCP {ECO:0000313|EMBL:KFC70966.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
mcpA2; methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein rbh
scnpilot_solids2_trim150_scaffold_2594_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10282..10794)
DNA (513bp) protein (171aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:KFC66872.1}; EC=2.7.6.3 {ECO:0000313|EMBL:KFC66872.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037F6C8E
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
scnpilot_solids2_trim150_scaffold_2594_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10787..11107)
DNA (321bp) protein (107aa)
dihydroneopterin aldolase (EC:4.1.2.25); K01633 dihydroneopterin aldolase [EC:4.1.2.25]
Dihydroneopterin aldolase n=1 Tax=Streptococcus ictaluri 707-05 RepID=G5K3H6_9STRE
Dihydroneopterin aldolase {ECO:0000313|EMBL:KFC66871.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_2594_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11104..11949)
DNA (846bp) protein (282aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15]
Dihydropteroate synthase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ITV2_METNO
scnpilot_solids2_trim150_scaffold_2594_14
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12354..16439
DNA (4086bp) protein (1362aa)
Non-ribosomal peptide synthetase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QUJ4_METTR rbh
Putative non-ribosomal peptide synthetase {ECO:0000313|EMBL:CBS88339.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
putative non-ribosomal peptide synthetase rbh
scnpilot_solids2_trim150_scaffold_2594_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16500..16910
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N6D2_RHOPA
Cupin {ECO:0000313|EMBL:KIZ45511.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2594_16
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17301..18884
DNA (1584bp) protein (528aa)
UPI0003CFB8D3 related cluster n=1 Tax=unknown RepID=UPI0003CFB8D3
Sodium:proton antiporter {ECO:0000313|EMBL:ESZ19710.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
Kef-type K+ transport system, predicted NAD-binding component
scnpilot_solids2_trim150_scaffold_2594_17
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18845..19150
DNA (306bp) protein (102aa)
UPI0003CFB8D3 related cluster n=1 Tax=unknown RepID=UPI0003CFB8D3
Sodium:proton antiporter {ECO:0000313|EMBL:ESZ19710.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
Kef-type K+ transport system, predicted NAD-binding component
scnpilot_solids2_trim150_scaffold_2594_18
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19265..20506
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IUT6_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL57154.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_solids2_trim150_scaffold_2594_19
bacterium YEK0313, Bacteria

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20540..21625
DNA (1086bp) protein (362aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] rbh
chorismate synthase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031C2045 rbh
Displaying 19 items

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