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scnpilot_solids2_trim150_scaffold_2640

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2640_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..438)
DNA (438bp) protein (146aa)
Recombination associated protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W764_9GAMM
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA recombination-dependent growth factor C
scnpilot_solids2_trim150_scaffold_2640_2
unknown

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comp(450..641)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2640_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(738..1598)
DNA (861bp) protein (287aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
signal peptidase I (EC:3.4.21.89)
signal peptidase n=1 Tax=Dyella japonica RepID=UPI0003137C00
scnpilot_solids2_trim150_scaffold_2640_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1698..2534)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAK6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96497.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_2640_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2537..3403)
DNA (867bp) protein (289aa)
S1/P1 Nuclease n=1 Tax=Rhodanobacter denitrificans RepID=M4NHE7_9GAMM
S1/P1 Nuclease
S1/P1 Nuclease {ECO:0000313|EMBL:AGG89068.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2640_6
unknown

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comp(3400..3780)
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2640_7
unknown

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comp(3780..4112)
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2640_8
unknown

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comp(4125..4523)
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2640_9
unknown

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comp(4520..5251)
DNA (732bp) protein (244aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2640_10
unknown

Not on your lists

comp(5281..5469)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2640_11

Not on your lists

5813..8278
DNA (2466bp) protein (822aa)
Cobyrinic acid ac-diamide synthase n=2 Tax=mine drainage metagenome RepID=T1BRB2_9ZZZZ rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EQD56510.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ParB-like partition protein
scnpilot_solids2_trim150_scaffold_2640_12
unknown

Not on your lists

8275..9918
DNA (1644bp) protein (548aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2640_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10116..11246
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NN09_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89071.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2640_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11607..12080
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE61_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89070.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2640_15
Shewanella sp. W3-18-1, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12153..12353)
DNA (201bp) protein (67aa)
Carbon storage regulator homolog n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=CSRA_SHESH
carbon storage regulator; K03563 carbon storage regulator
Carbon storage regulator homolog {ECO:0000255|HAMAP-Rule:MF_00167}; TaxID=351745 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain W3-18-1).;"
scnpilot_solids2_trim150_scaffold_2640_16
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12390..13040)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BZV7_XANC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ19959.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
scnpilot_solids2_trim150_scaffold_2640_17
unknown

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comp(13132..13809)
DNA (678bp) protein (226aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2640_18
unknown

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comp(13902..14150)
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2640_19
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14186..14677)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KKL7_SHEWM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA87234.1}; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella woodyi (strain ATCC 51908 / MS32).;"
scnpilot_solids2_trim150_scaffold_2640_20
unknown

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comp(14677..14880)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2640_21
unknown

Not on your lists

comp(14977..15192)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2640_22
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15282..16205)
DNA (924bp) protein (308aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
Putative DNA methyltransferase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q7WX17_CUPNH rbh
DNA methyltransferase rbh
Displaying 22 items

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