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scnpilot_solids2_trim150_scaffold_2841

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2841_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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1..255
DNA (255bp) protein (85aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIN8_NAKMY
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACV80503.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_2841_2
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(286..1083)
DNA (798bp) protein (266aa)
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EXZ2_MODMB rbh
beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase rbh
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CCH88255.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
scnpilot_solids2_trim150_scaffold_2841_3
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(1080..1781)
DNA (702bp) protein (234aa)
ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase (EC:4.1.3.17) rbh
4-carboxy-4-hydroxy-2-oxoadipate aldolase {ECO:0000313|EMBL:CCH88258.1}; EC=4.1.3.17 {ECO:0000313|EMBL:CCH88258.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
4-carboxy-4-hydroxy-2-oxoadipate aldolase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EXZ5_MODMB rbh
scnpilot_solids2_trim150_scaffold_2841_4
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1778..2506)
DNA (729bp) protein (243aa)
Putative 4-oxalmesaconate hydratase n=1 Tax=Streptomyces afghaniensis 772 RepID=S4NNA4_9ACTO rbh
Putative 4-oxalmesaconate hydratase {ECO:0000313|EMBL:EPJ39854.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_2841_5
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(2522..3196)
DNA (675bp) protein (225aa)
Transcriptional regulator, GntR family n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EXZ6_MODMB
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCH88259.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
scnpilot_solids2_trim150_scaffold_2841_6
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3469..4167
DNA (699bp) protein (233aa)
GntR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B34BD8
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EJY55088.1}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperidum URH17-3-68.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_2841_7
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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4170..5099
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N249_9ACTO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGL17763.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
scnpilot_solids2_trim150_scaffold_2841_8
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5194..5967
DNA (774bp) protein (258aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X199_9PSEU rbh
Nitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDS89141.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_2841_9
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5964..6800
DNA (837bp) protein (279aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X1A0_9PSEU rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EHR48624.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
binding-protein-dependent transport system inner membrane protein
scnpilot_solids2_trim150_scaffold_2841_10
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6779..8050
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B2F2F7
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EHR48625.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
scnpilot_solids2_trim150_scaffold_2841_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8121..8432)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000313C438
MFS transporter {ECO:0000313|EMBL:EZQ15004.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
major facilitator superfamily protein
Displaying 11 items

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