ggKbase home page

scnpilot_solids2_trim150_scaffold_2989

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2989_1
unknown

Not on your lists

comp(3..446)
DNA (444bp) protein (148aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2989_2
Leptospirillum sp. Group II 'C75', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

1214..2605
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ15 RepID=UPI00036D38C6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ76909.1}; TaxID=1159328 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II 'C75'.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_2989_3
unknown

Not on your lists

2729..2923
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2989_4
unknown

Not on your lists

2916..3134
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2989_5

Not on your lists

3198..4661
DNA (1464bp) protein (488aa)
Probable integrase-recombinase protein n=1 Tax=Rhodopirellula baltica (strain SH1) RepID=Q7UJ13_RHOBA
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48213.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
integrase-recombinase protein
scnpilot_solids2_trim150_scaffold_2989_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5118..5915)
DNA (798bp) protein (266aa)
Ribokinase-like domain-containing protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TT93_9RHIZ
Ribokinase-like domain-containing protein {ECO:0000313|EMBL:ENN83699.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
sugar kinase
scnpilot_solids2_trim150_scaffold_2989_7
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6269..7399)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RXB3_SYNP3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFY61889.1}; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
scnpilot_solids2_trim150_scaffold_2989_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(7396..9330)
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSI2_OPITP rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACB73839.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
scnpilot_solids2_trim150_scaffold_2989_9
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(9327..10442)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSI3_OPITP rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACB73840.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
scnpilot_solids2_trim150_scaffold_2989_10

Not on your lists

comp(10458..12398)
DNA (1941bp) protein (647aa)
Putative HAD superfamily hydrolase n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RWH9_SYNP3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL54587.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative HAD superfamily hydrolase rbh
scnpilot_solids2_trim150_scaffold_2989_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12561..13067)
DNA (507bp) protein (169aa)
Acetyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQK8_SINAD
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGA31210.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_2989_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13060..13338)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPB0_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31209.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 12 items

View Taxonomy