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scnpilot_solids2_trim150_scaffold_2998

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2998_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..246)
DNA (246bp) protein (82aa)
atpF; ATP synthase, subunit b (EC:3.6.3.14)
ATP synthase subunit b n=3 Tax=Variovorax RepID=C5CNB5_VARPS
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scnpilot_solids2_trim150_scaffold_2998_2
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(348..611)
DNA (264bp) protein (88aa)
ATP synthase F0 C subunit; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
F0F1 ATP synthase subunit C n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C457A
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
scnpilot_solids2_trim150_scaffold_2998_3
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(692..1591)
DNA (900bp) protein (300aa)
ATP synthase F0 subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase subunit a n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q4I8_ACIAP
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_solids2_trim150_scaffold_2998_4
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1581..2126)
DNA (546bp) protein (182aa)
ATP synthase I chain n=2 Tax=Acidovorax RepID=B9MB96_ACIET
ATP synthase subunit I; K02116 ATP synthase protein I
Putative ATP synthase protein I {ECO:0000313|EMBL:ABM40555.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_2998_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2336..2581
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW98_9BURK
hypothetical protein
UPF0250 protein C380_01970 {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_solids2_trim150_scaffold_2998_6
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2599..3279
DNA (681bp) protein (227aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] rbh
Octanoyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C2D0_9BURK rbh
scnpilot_solids2_trim150_scaffold_2998_7
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3347..5005)
DNA (1659bp) protein (553aa)
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9); K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] rbh
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2S6_ACISJ rbh
scnpilot_solids2_trim150_scaffold_2998_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5127..5396)
DNA (270bp) protein (90aa)
phosphocarrier protein HPr n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035C9A0E
HPrNtr; K11189 phosphocarrier protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_solids2_trim150_scaffold_2998_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5405..5809)
DNA (405bp) protein (135aa)
PTS system fructose subfamily transporter subunit IIA; K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69]
PTS fructose transporter subunit IIA n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036AAA36
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:GAD21801.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids2_trim150_scaffold_2998_10
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5895..6443
DNA (549bp) protein (183aa)
GCN5 family acetyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036B4846
GCN5 family acetyltransferase {ECO:0000313|EMBL:KJA10919.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
GCN5-like N-acetyltransferase
scnpilot_solids2_trim150_scaffold_2998_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6464..6970)
DNA (507bp) protein (169aa)
Redoxin domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVI7_ALIDB
redoxin domain protein
Redoxin domain protein {ECO:0000313|EMBL:ADU98197.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids2_trim150_scaffold_2998_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7087..7356)
DNA (270bp) protein (90aa)
30S ribosomal protein S17 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000378361F
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
scnpilot_solids2_trim150_scaffold_2998_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7369..7566)
DNA (198bp) protein (66aa)
50S ribosomal protein L29 n=2 Tax=Alicycliphilus denitrificans RepID=E8TVI5_ALIDB
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids2_trim150_scaffold_2998_14
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7579..7995)
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=RL16_ACIAC
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
50S ribosomal protein L16 {ECO:0000255|HAMAP-Rule:MF_01342}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Displaying 14 items

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