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scnpilot_solids2_trim150_scaffold_4768

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4768_1
unknown

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comp(870..995)
DNA (126bp) protein (42aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003617843
scnpilot_solids2_trim150_scaffold_4768_2
unknown

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comp(1705..1839)
DNA (135bp) protein (45aa)
hypothetical protein, partial n=3 Tax=Niabella aurantiaca RepID=UPI000382644A
scnpilot_solids2_trim150_scaffold_4768_3
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1926..2495)
DNA (570bp) protein (190aa)
RNA polymerase sigma-70 factor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2W3_PEDHD
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ACU03176.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_4768_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2668..3819
DNA (1152bp) protein (384aa)
anti-FecI sigma factor FecR n=1 Tax=Cytophagales str. B6 RepID=UPI0003B73B0A
Uncharacterized protein {ECO:0000313|EMBL:KIC95455.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anti-FecI sigma factor FecR
scnpilot_solids2_trim150_scaffold_4768_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3992..4753
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003604C51
Collagen-binding protein {ECO:0000313|EMBL:KIC94052.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
TonB-linked outer membrane protein, SusC/RagA family
scnpilot_solids2_trim150_scaffold_4768_6
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4819..6057
DNA (1239bp) protein (413aa)
TonB-dependent receptor plug n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1T3_CYCMS
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEL23939.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
Displaying 6 items

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