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scnpilot_solids2_trim150_scaffold_4802

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4802_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..180
DNA (180bp) protein (60aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Triosephosphate isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG2_9GAMM
scnpilot_solids2_trim150_scaffold_4802_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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204..665
DNA (462bp) protein (154aa)
Preprotein translocase subunit SecG n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI12_9GAMM
Preprotein translocase subunit SecG {ECO:0000313|EMBL:EIL99103.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein translocase subunit secG
scnpilot_solids2_trim150_scaffold_4802_trna_1
unknown

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678..759
DNA (82bp)
transferRNA Leu
scnpilot_solids2_trim150_scaffold_4802_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1281..2123
DNA (843bp) protein (281aa)
Phage-related integrase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN84_9GAMM
Phage-related integrase {ECO:0000313|EMBL:EIL88675.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phage-related integrase
scnpilot_solids2_trim150_scaffold_4802_4
unknown

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2236..2574
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4802_5
unknown

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2574..2810
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4802_6
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3659..3883
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UDZ3_XANAP
Uncharacterized protein {ECO:0000313|EMBL:CEM58187.1}; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4802_7
unknown

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3873..4205
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4802_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4202..4642
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1B3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93254.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4802_9

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4639..6519
DNA (1881bp) protein (627aa)
Prophage primase n=1 Tax=mine drainage metagenome RepID=T1AV19_9ZZZZ
Prophage primase {ECO:0000313|EMBL:EQD61362.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA/RNA helicase
scnpilot_solids2_trim150_scaffold_4802_10
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6516..6929
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YGR8_THIV6
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids2_trim150_scaffold_4802_11
unknown

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6926..7447
DNA (522bp) protein (174aa)

This feature has no annotations

Displaying 12 items

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