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scnpilot_solids2_trim150_scaffold_4835

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4835_1
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1..543
DNA (543bp) protein (181aa)
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase {ECO:0000313|EMBL:EPR66625.1}; EC=3.7.1.- {ECO:0000313|EMBL:EPR66625.1};; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
alpha/beta hydrolase (EC:3.-.-.-)
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7V8P1_9BACT
scnpilot_solids2_trim150_scaffold_4835_2
unknown

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788..967
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4835_3
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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960..1379
DNA (420bp) protein (140aa)
PilT protein domain protein id=2957580 bin=GWF1_Spirochaetes_51_8 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
twitching motility protein PilT
Tax=RBG_16_Ignavibacteria_36_9_curated
scnpilot_solids2_trim150_scaffold_4835_4
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1586..2167
DNA (582bp) protein (194aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Galbibacter marinus RepID=K2PVX1_9FLAO
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EKF55649.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
Crp/Fnr family transcriptional regulator
scnpilot_solids2_trim150_scaffold_4835_5
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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2868..3242
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000373EE6A
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_4835_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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3247..3525
DNA (279bp) protein (93aa)
XRE family transcriptional regulator id=4923351 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
putative transcriptional regulator with C-terminal CBS domains
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids2_trim150_scaffold_4835_7
unknown

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comp(3646..3828)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4835_8
unknown

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3938..4159
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4835_9
bacterium UASB270, Bacteria

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4153..4371
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002F94D39
PilT protein-like protein {ECO:0000313|EMBL:GAK56356.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
Displaying 9 items

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