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scnpilot_solids2_trim150_scaffold_1003

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1003_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..536)
DNA (534bp) protein (178aa)
Penicillin-binding protein 1B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Q4_9GAMM
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
penicillin-binding protein 1B
scnpilot_solids2_trim150_scaffold_1003_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(685..1524)
DNA (840bp) protein (280aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Q3_9GAMM rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIL94444.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
nucleoside-diphosphate-sugar epimerase
scnpilot_solids2_trim150_scaffold_1003_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1532..3238)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Q2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94443.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1003_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3324..5486)
DNA (2163bp) protein (721aa)
RelA/SpoT family (P)ppGpp synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Q1_9GAMM rbh
RelA/SpoT family (P)ppGpp synthetase {ECO:0000313|EMBL:EIL94442.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
(p)ppGpp synthetase, RelA/SpoT family rbh
scnpilot_solids2_trim150_scaffold_1003_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5547..9584)
DNA (4038bp) protein (1346aa)
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Q0_9GAMM rbh
ATP-dependent RNA helicase {ECO:0000313|EMBL:EIL94441.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATP-dependent helicase HrpA rbh
scnpilot_solids2_trim150_scaffold_1003_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9729..10196
DNA (468bp) protein (156aa)
DpsA protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4P9_9GAMM rbh
DpsA protein {ECO:0000313|EMBL:EIL94440.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA-binding ferritin-like protein (oxidative damage protectant)
scnpilot_solids2_trim150_scaffold_1003_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10252..12222)
DNA (1971bp) protein (657aa)
Sulfatase family protein 11 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4P8_9GAMM rbh
Sulfatase family protein 11 {ECO:0000313|EMBL:EIL94439.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sulfatase rbh
scnpilot_solids2_trim150_scaffold_1003_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12380..12670)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4P7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94438.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_1003_9
unknown

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comp(12830..12976)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1003_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13218..13961)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4P6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94437.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_1003_11
unknown

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comp(14025..14168)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1003_12
unknown

Not on your lists

comp(14396..14542)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1003_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14668..16794)
DNA (2127bp) protein (709aa)
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain n=1 Tax=Rhodanobacter denitrificans RepID=M4NRS9_9GAMM
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain {ECO:0000313|EMBL:AGG90251.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1003_14
unknown

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comp(16855..17472)
DNA (618bp) protein (206aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1003_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17578..18849)
DNA (1272bp) protein (424aa)
Anibiotic ABC transporter efflux pump n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4P1_9GAMM rbh
Anibiotic ABC transporter efflux pump {ECO:0000313|EMBL:EIL94432.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
multidrug resistance efflux pump rbh
scnpilot_solids2_trim150_scaffold_1003_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19354..21480
DNA (2127bp) protein (709aa)
Putative Beta-(1-3)-glucosyl transferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4P0_9GAMM rbh
Putative Beta-(1-3)-glucosyl transferase {ECO:0000313|EMBL:EIL94431.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
exo-beta-1,3-glucanase
Displaying 16 items

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