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scnpilot_solids2_trim150_scaffold_1009

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1009_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..913
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5F7_AROAE
Helicase {ECO:0000313|EMBL:GAO21731.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1009_2
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1230..5018)
DNA (3789bp) protein (1263aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000368BB63 rbh
Helicase SNF2 {ECO:0000313|EMBL:KJJ99148.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
helicase rbh
scnpilot_solids2_trim150_scaffold_1009_3
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5025..5603)
DNA (579bp) protein (193aa)
hypothetical protein, partial n=1 Tax=Variovorax paradoxus RepID=UPI000361D1E4
Uncharacterized protein {ECO:0000313|EMBL:KHK57294.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1009_4
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5600..6727)
DNA (1128bp) protein (376aa)
hypothetical protein, partial n=1 Tax=Variovorax paradoxus RepID=UPI000361D1E4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJJ99149.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1009_5
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6724..7434)
DNA (711bp) protein (237aa)
flagellar motor protein MotB n=1 Tax=Variovorax paradoxus RepID=UPI00037BB62D rbh
Flagellar motor protein MotB {ECO:0000313|EMBL:KHK57293.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1009_6
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7438..9498)
DNA (2061bp) protein (687aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036F780E rbh
TerC family integral membrane protein {ECO:0000313|EMBL:KHK57292.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1009_7
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9495..9713)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003666EF3
Uncharacterized protein {ECO:0000313|EMBL:KHK57376.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
scnpilot_solids2_trim150_scaffold_1009_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9732..11567)
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML81_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK89971.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1009_9
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11602..13797)
DNA (2196bp) protein (732aa)
Bacteriophage phiC31 resistance protein pglZ, putative n=1 Tax=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) RepID=Q2T2C3_BURTA rbh
bacteriophage phiC31 resistance protein pglZ rbh
Bacteriophage phiC31 resistance protein pglZ, putative {ECO:0000313|EMBL:ABC37150.1}; PglZ domain protein {ECO:0000313|EMBL:AIP25402.1}; TaxID=271848 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 /; CIP 106301).;"
scnpilot_solids2_trim150_scaffold_1009_10
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13794..17492)
DNA (3699bp) protein (1233aa)
PglY n=1 Tax=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) RepID=Q2T2C4_BURTA rbh
PglY {ECO:0000313|EMBL:ABC37511.1}; Putative pglY {ECO:0000313|EMBL:AIP27265.1}; TaxID=271848 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 /; CIP 106301).;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1009_11
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17525..21220)
DNA (3696bp) protein (1232aa)
Putative uncharacterized protein n=1 Tax=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) RepID=Q2T2C5_BURTA rbh
hypothetical protein rbh
Eco57I restriction-modification methylase family protein {ECO:0000313|EMBL:AIP26834.1}; Uncharacterized protein {ECO:0000313|EMBL:ABC37758.1}; TaxID=271848 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 /; CIP 106301).;"
scnpilot_solids2_trim150_scaffold_1009_12
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21217..25428)
DNA (4212bp) protein (1404aa)
Protein kinase domain protein n=1 Tax=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) RepID=Q2T2C6_BURTA rbh
Kinase domain protein {ECO:0000313|EMBL:AIP26408.1}; Protein kinase domain protein {ECO:0000313|EMBL:ABC38589.1}; TaxID=271848 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 /; CIP 106301).;"
protein kinase domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_1009_13
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25525..26433)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037CC966 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD86431.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
scnpilot_solids2_trim150_scaffold_1009_14
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26731..27684
DNA (954bp) protein (318aa)
Regulatory protein, LysR-family n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5I7_AROAE rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO21747.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
reg3; LysR family transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_1009_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27713..27895)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5I8_AROAE
Transcriptional regulator {ECO:0000313|EMBL:GAO21748.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1009_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28030..28737
DNA (708bp) protein (236aa)
Regulatory protein, LysR-family n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5I9_AROAE
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO21749.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
reg2; LysR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1009_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28799..30670)
DNA (1872bp) protein (624aa)
Integrase (Int) n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5J0_AROAE rbh
Integrase family protein {ECO:0000313|EMBL:GAO21750.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
int; integrase (int) rbh
scnpilot_solids2_trim150_scaffold_1009_18
unknown

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comp(31068..31646)
DNA (579bp) protein (193aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1009_19
unknown

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comp(31804..32262)
DNA (459bp) protein (153aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1009_20
unknown

Not on your lists

comp(32648..33196)
DNA (549bp) protein (183aa)

This feature has no annotations

Displaying 20 items

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