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scnpilot_solids2_trim150_scaffold_1011

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1011_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..1490
DNA (1488bp) protein (496aa)
SNF2-related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF39_NIAKG
SNF2-related protein
SNF2-related protein {ECO:0000313|EMBL:AEW02659.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1011_2
unknown

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comp(1496..1630)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1011_3
unknown

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comp(1749..1904)
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1011_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2091..3365)
DNA (1275bp) protein (425aa)
AAA ATPase central domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK95_NIAKG
AAA ATPase; K07478 putative ATPase
AAA ATPase central domain protein {ECO:0000313|EMBL:AEV96529.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1011_5
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3441..4718)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AID2_IGNAJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFH48739.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
scnpilot_solids2_trim150_scaffold_1011_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4842..5168
DNA (327bp) protein (109aa)
pyrophosphatase n=1 Tax=Segetibacter koreensis RepID=UPI0003657AE3
Pyrophosphatase {ECO:0000313|EMBL:KIC96200.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
putative pyrophosphatase
scnpilot_solids2_trim150_scaffold_1011_7
Cyanothece sp. ATCC 51142, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(5278..5577)
DNA (300bp) protein (100aa)
PIN-domain protein n=2 Tax=Cyanothece RepID=A1KYF9_CYAA5
pilt protein domain protein; K07062
PIN-domain protein {ECO:0000313|EMBL:AAW57012.1}; Uncharacterized protein {ECO:0000313|EMBL:ACB49934.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;"
scnpilot_solids2_trim150_scaffold_1011_8
unknown

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comp(5562..5819)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1011_9
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5957..7444)
DNA (1488bp) protein (496aa)
Xylulose kinase {ECO:0000313|EMBL:EOR96418.1}; EC=2.7.1.17 {ECO:0000313|EMBL:EOR96418.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
Xylulokinase; K00854 xylulokinase [EC:2.7.1.17] rbh
Xylulose kinase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GXL6_9SPHI rbh
scnpilot_solids2_trim150_scaffold_1011_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7472..8626)
DNA (1155bp) protein (385aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
D-mannonate dehydratase; K01686 mannonate dehydratase [EC:4.2.1.8] rbh
mannonate dehydratase n=1 Tax=Niabella aurantiaca RepID=UPI000379EEF4 rbh
scnpilot_solids2_trim150_scaffold_1011_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8935..12264
DNA (3330bp) protein (1110aa)
preprotein translocase subunit SecA n=1 Tax=Segetibacter koreensis RepID=UPI00037B0218
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
protein translocase subunit secA; K03070 preprotein translocase subunit SecA
scnpilot_solids2_trim150_scaffold_1011_12
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12346..13053)
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1J8_PEDHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU02974.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_1011_13
unknown

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comp(13130..13792)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TUV5_9FLAO
scnpilot_solids2_trim150_scaffold_1011_14
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13833..14876)
DNA (1044bp) protein (348aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:EOR94624.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EOR94624.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
alcohol dehydrogenase GroES domain-containing protein; K13979 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-] rbh
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000344A40E rbh
scnpilot_solids2_trim150_scaffold_1011_15
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

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comp(15278..16402)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002E3A097
transglutaminase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_1011_16
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16610..17872
DNA (1263bp) protein (421aa)
Sodium/hydrogen exchanger n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZU73_9BACT rbh
Sodium:proton antiporter {ECO:0000313|EMBL:KEY18087.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
sodium/hydrogen exchanger; K03316 monovalent cation:H+ antiporter, CPA1 family
scnpilot_solids2_trim150_scaffold_1011_17
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17966..18958
DNA (993bp) protein (331aa)
SMP-30/gluconolaconase/LRE-like region-containing protein; K01053 gluconolactonase [EC:3.1.1.17]
SMP-30/Gluconolaconase/LRE-like region-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EIY0_RUNSL
SMP-30/Gluconolaconase/LRE-like region-containing protein {ECO:0000313|EMBL:AEI49654.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_1011_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19137..19559)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO45098.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1011_19
unknown

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comp(19528..20322)
DNA (795bp) protein (265aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1011_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20353..20904)
DNA (552bp) protein (184aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT1_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW03102.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1011_21
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21050..21340)
DNA (291bp) protein (97aa)
Sugar transferase n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6G3K5_9PORP
sugar transferase
Sugar transferase {ECO:0000313|EMBL:ADY32012.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
Displaying 21 items

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