ggKbase home page

scnpilot_solids2_trim150_scaffold_1020

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1020_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1..729)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E5Y8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10908.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
scnpilot_solids2_trim150_scaffold_1020_2
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(726..3359)
DNA (2634bp) protein (878aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI00036CFEEC rbh
ATP-binding protein {ECO:0000313|EMBL:AJK56495.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
ATP/GTP-binding protein rbh
scnpilot_solids2_trim150_scaffold_1020_3
unknown

Not on your lists

comp(3356..3583)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1020_4
unknown

Not on your lists

comp(3580..3897)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037CA617
scnpilot_solids2_trim150_scaffold_1020_5
Saccharomonospora phage PIS 136, Caudovirales, Viruses

Not on your lists

comp(3890..4759)
DNA (870bp) protein (290aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=182851 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Saccharomonospora phage PIS 136.;"
restriction/modification system DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
Cytosine-specific methyltransferase n=1 Tax=Saccharomonospora phage PIS 136 RepID=I4AZL4_9CAUD
scnpilot_solids2_trim150_scaffold_1020_6

Not on your lists

comp(4794..5774)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI00037DB75B
Uncharacterized protein {ECO:0000313|EMBL:KKN81071.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_1020_7
unknown

Not on your lists

comp(5775..6272)
DNA (498bp) protein (166aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1020_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6269..7501)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E452_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN11541.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
scnpilot_solids2_trim150_scaffold_1020_9
unknown

Not on your lists

comp(7498..9795)
DNA (2298bp) protein (766aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1020_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9792..12365)
DNA (2574bp) protein (858aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYZ9_CONWI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB49873.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1020_11
unknown

Not on your lists

comp(12362..13066)
DNA (705bp) protein (235aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1020_12
unknown

Not on your lists

comp(13063..13164)
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1020_13
unknown

Not on your lists

comp(13164..13364)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1020_14
unknown

Not on your lists

comp(13361..14221)
DNA (861bp) protein (287aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1020_15
Photobacterium sp. AK15, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14459..14806)
DNA (348bp) protein (116aa)
Arsenate reductase n=1 Tax=Photobacterium sp. AK15 RepID=L8JHE3_9GAMM
Arsenate reductase {ECO:0000313|EMBL:ELR67673.1}; TaxID=1056511 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK15.;"
regulatory protein ArsR; K03892 ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1020_16
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14962..15849)
DNA (888bp) protein (296aa)
Peptidoglycan-binding lysin domain protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IWU3_FRASU
peptidoglycan-binding lysin domain protein
Peptidoglycan-binding lysin domain protein {ECO:0000313|EMBL:ADP82567.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_solids2_trim150_scaffold_1020_17
unknown

Not on your lists

comp(15866..16468)
DNA (603bp) protein (201aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1020_18
unknown

Not on your lists

comp(16495..18777)
DNA (2283bp) protein (761aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1020_19
Strigamia maritima, Strigamia, Geophilomorpha, Pleurostigmophora, Arthropoda, Metazoa

Not on your lists

comp(18780..20105)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Strigamia maritima RepID=T1JFV4_STRMM
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SMAR012719-PA}; TaxID=126957 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Myriapoda; Chilopoda; Pleurostigmophora; Geophilomorpha; Linotaeniidae; Strigamia.;" source="Strigamia maritima (European centipede) (Geophilus maritimus).;"
PT repeat family protein
scnpilot_solids2_trim150_scaffold_1020_20
unknown

Not on your lists

comp(20513..20710)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1020_21
unknown

Not on your lists

comp(20716..20967)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1020_22
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21508..21879
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E872_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10137.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1020_23
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21872..22534
DNA (663bp) protein (221aa)
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:EWS59333.1}; EC=2.1.1.163 {ECO:0000313|EMBL:EWS59333.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Methyltransferase type 11 n=1 Tax=Paenibacillus alvei DSM 29 RepID=K4Z745_PAEAL
type 11 methyltransferase
scnpilot_solids2_trim150_scaffold_1020_24
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22564..23781)
DNA (1218bp) protein (406aa)
Putative Prolipoprotein diacylglyceryl transferase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RQ36_BLASD
Putative membrane protein {ECO:0000313|EMBL:AIG80428.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
lgt2; putative Prolipoprotein diacylglyceryl transferase
scnpilot_solids2_trim150_scaffold_1020_25
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23789..25984)
DNA (2196bp) protein (732aa)
Cytochrome c assembly protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7Z7_CONWI rbh
cytochrome C assembly protein; K02198 cytochrome c-type biogenesis protein CcmF rbh
Cytochrome c assembly protein {ECO:0000313|EMBL:ADB52891.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1020_26

Not on your lists

comp(25995..26420)
DNA (426bp) protein (142aa)
cytochrome C biogenesis protein CcdA n=1 Tax=Patulibacter americanus RepID=UPI0003B78772
cytochrome C biogenesis protein CcmE-like protein; K02197 cytochrome c-type biogenesis protein CcmE
Uncharacterized protein {ECO:0000313|EMBL:KKK51130.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_1020_27
unknown

Not on your lists

26569..26706
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1020_28
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26718..28580)
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI000372329A
Uncharacterized protein {ECO:0000313|EMBL:EST37576.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
acyltransferase 3
scnpilot_solids2_trim150_scaffold_1020_29

Not on your lists

comp(28925..29614)
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL73015.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
redoxin domain-containing protein id=14633026 bin=bin9_gal15 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
resA; cytochrome c biogenesis protein
scnpilot_solids2_trim150_scaffold_1020_30
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(29677..30711)
DNA (1035bp) protein (345aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1C0_CONWI
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ADB52083.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying items 1-30 of 47 in total

View Taxonomy