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scnpilot_solids2_trim150_scaffold_1027

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1027_1
unknown

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249..872
DNA (624bp) protein (208aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1027_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(958..1668)
DNA (711bp) protein (237aa)
Nucleotidyl transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ2_NIAKG rbh
nucleotidyltransferase rbh
Nucleotidyl transferase {ECO:0000313|EMBL:AEW02905.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1027_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1687..3138)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94838.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1027_4
unknown

Not on your lists

3391..3741
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CD7FB
scnpilot_solids2_trim150_scaffold_1027_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3752..4888
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362303B rbh
Membrane protein {ECO:0000313|EMBL:AKD56306.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1027_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4973..6433)
DNA (1461bp) protein (487aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] rbh
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
RNA-splicing ligase RtcB n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK26_NIAKG rbh
scnpilot_solids2_trim150_scaffold_1027_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6548..7639)
DNA (1092bp) protein (364aa)
AAA ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK21_NIAKG rbh
AAA ATPase rbh
AAA ATPase {ECO:0000313|EMBL:AEW02959.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1027_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7733..8833)
DNA (1101bp) protein (367aa)
Band 7 protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK24_NIAKG rbh
hypothetical protein rbh
Band 7 protein {ECO:0000313|EMBL:AEW02962.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1027_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9508..9987)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK22_NIAKG
hypothetical protein; K09776 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02960.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1027_10
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(10050..10658)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2U8I1_RALPJ
hypothetical protein
Tax=RBG_16_Planctomycetes_41_13_curated
scnpilot_solids2_trim150_scaffold_1027_trna_9
unknown

Not on your lists

comp(10713..10784)
DNA (72bp)
transferRNA Phe
scnpilot_solids2_trim150_scaffold_1027_trna_8
unknown

Not on your lists

comp(10795..10879)
DNA (85bp)
transferRNA Ser
scnpilot_solids2_trim150_scaffold_1027_trna_7
unknown

Not on your lists

comp(10971..11042)
DNA (72bp)
transferRNA Asn
scnpilot_solids2_trim150_scaffold_1027_trna_6
unknown

Not on your lists

comp(11046..11118)
DNA (73bp)
transferRNA Glu
scnpilot_solids2_trim150_scaffold_1027_trna_5
unknown

Not on your lists

comp(11124..11196)
DNA (73bp)
transferRNA Ile
scnpilot_solids2_trim150_scaffold_1027_trna_4
unknown

Not on your lists

comp(11201..11272)
DNA (72bp)
transferRNA Met
scnpilot_solids2_trim150_scaffold_1027_11
unknown

Not on your lists

comp(11236..11613)
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1027_trna_3
unknown

Not on your lists

comp(11281..11351)
DNA (71bp)
transferRNA Arg
scnpilot_solids2_trim150_scaffold_1027_trna_2
unknown

Not on your lists

comp(11358..11430)
DNA (73bp)
transferRNA His
scnpilot_solids2_trim150_scaffold_1027_trna_1
unknown

Not on your lists

comp(11442..11513)
DNA (72bp)
transferRNA Gln
scnpilot_solids2_trim150_scaffold_1027_12
unknown

Not on your lists

comp(11623..11775)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1027_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12203..13312)
DNA (1110bp) protein (370aa)
radical SAM protein n=1 Tax=Niabella aurantiaca RepID=UPI0003769235 rbh
Radical SAM protein {ECO:0000313|EMBL:AHF15019.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
radical SAM protein rbh
scnpilot_solids2_trim150_scaffold_1027_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13356..13979)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK13_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02951.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1027_15
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14203..14823)
DNA (621bp) protein (207aa)
phosphoglycerate mutase; K02226 alpha-ribazole phosphatase [EC:3.1.3.73]
Phosphoglycerate mutase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTB5_PEDHD
Phosphoglycerate mutase {ECO:0000313|EMBL:ACU05693.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_1027_16
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14833..16275)
DNA (1443bp) protein (481aa)
Carbohydrate kinase FGGY n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTB6_PEDHD rbh
carbohydrate kinase FGGY rbh
Carbohydrate kinase FGGY {ECO:0000313|EMBL:ACU05694.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_1027_17
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16370..17818)
DNA (1449bp) protein (483aa)
carbohydrate kinase FGGY; K11216 autoinducer 2 (AI-2) kinase [EC:2.7.1.-] rbh
Carbohydrate kinase FGGY n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTB7_PEDHD rbh
Carbohydrate kinase FGGY {ECO:0000313|EMBL:ACU05695.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_1027_18
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17847..18995)
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYU9_PEDHD rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ21783.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1027_19
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19050..20054)
DNA (1005bp) protein (335aa)
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTB8_PEDHD rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:ACU05696.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_1027_20
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20296..21153)
DNA (858bp) protein (286aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTB9_PEDHD rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU05697.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
Displaying 29 items

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