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scnpilot_solids2_trim150_scaffold_1036

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1036_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..786)
DNA (786bp) protein (262aa)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X2_9GAMM
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EIL94863.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
isopropylmalate/homocitrate/citramalate synthase
scnpilot_solids2_trim150_scaffold_1036_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(973..2961)
DNA (1989bp) protein (663aa)
acetyl/propionyl-CoA carboxylase, alpha subunit (EC:6.3.4.14 6.4.1.4) rbh
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X3_9GAMM
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:EIL94864.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_1036_3
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3050..3562)
DNA (513bp) protein (171aa)
Cupin n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA77_9GAMM
Cupin {ECO:0000313|EMBL:KGI78403.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cupin
scnpilot_solids2_trim150_scaffold_1036_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3579..4370)
DNA (792bp) protein (264aa)
Enoyl-CoA hydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X4_9GAMM
Enoyl-CoA hydratase {ECO:0000313|EMBL:EIL94865.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
enoyl-CoA hydratase/carnithine racemase
scnpilot_solids2_trim150_scaffold_1036_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4455..4730
DNA (276bp) protein (92aa)
Fe2+ transport system protein A n=1 Tax=Rhodanobacter denitrificans RepID=M4NKU5_9GAMM
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:AGG88386.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1036_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4727..6538
DNA (1812bp) protein (604aa)
Fe2+ transport system protein B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X6_9GAMM
Fe2+ transport system protein B {ECO:0000313|EMBL:EIL94867.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Fe2+ transport system protein B
scnpilot_solids2_trim150_scaffold_1036_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6549..6851
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFJ6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88388.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1036_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6978..7163)
DNA (186bp) protein (62aa)
30S ribosomal protein S20 n=1 Tax=Rhodanobacter denitrificans RepID=I4WTR0_9GAMM
SSU ribosomal protein S20P
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1036_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7388..8983
DNA (1596bp) protein (532aa)
Integral membrane protein MviN n=1 Tax=Rhodanobacter denitrificans RepID=I4WTR1_9GAMM rbh
integral membrane protein MviN rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1036_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9021..9971
DNA (951bp) protein (317aa)
FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Riboflavin kinase n=2 Tax=Rhodanobacter denitrificans RepID=M4NKV0_9GAMM
scnpilot_solids2_trim150_scaffold_1036_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10072..12954
DNA (2883bp) protein (961aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM58_9GAMM
scnpilot_solids2_trim150_scaffold_1036_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12954..13496
DNA (543bp) protein (181aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y2_9GAMM
scnpilot_solids2_trim150_scaffold_1036_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13700..14473
DNA (774bp) protein (258aa)
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Y3_9GAMM
scnpilot_solids2_trim150_scaffold_1036_trna_1
unknown

Not on your lists

14751..14823
DNA (73bp)
transferRNA Thr
scnpilot_solids2_trim150_scaffold_1036_14
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14875..15387)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z7Q3_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EKU26052.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
scnpilot_solids2_trim150_scaffold_1036_15
unknown

Not on your lists

comp(15400..15669)
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1036_16
unknown

Not on your lists

comp(15683..16147)
DNA (465bp) protein (155aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1036_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16383..16910
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L7K7_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EQM87216.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1036_18
Pseudomonas extremaustralis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17010..17636)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036276CE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZI28914.1}; TaxID=1117958 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas extremaustralis 14-3 substr. 14-3b.;"
scnpilot_solids2_trim150_scaffold_1036_19
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17668..18177)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZKC4_XANCT
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KCB39826.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1036_20
Pectobacterium bacteriophage PM2, Caudovirales, Viruses

Not on your lists

comp(18189..18404)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:AHY25076.1}; TaxID=1429794 species="Viruses; unclassified phages.;" source="Pectobacterium bacteriophage PM2.;"
scnpilot_solids2_trim150_scaffold_1036_21
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18623..18862)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZHK8_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EKU26063.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
scnpilot_solids2_trim150_scaffold_1036_22
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18897..19622)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z7Q6_XANCT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU26062.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1036_23
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19847..20275)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z593_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EKU26060.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
scnpilot_solids2_trim150_scaffold_1036_24
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20250..20495)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002EA737F
Uncharacterized protein {ECO:0000313|EMBL:ETC84538.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1036_25
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20488..21006)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0003036E7D rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU26059.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1036_26
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21627..24011)
DNA (2385bp) protein (795aa)
Gp33 n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2V1R5_PSEST rbh
Gp33 {ECO:0000313|EMBL:EMD99751.1}; TaxID=1212548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri NF13.;"
Gp33 rbh
scnpilot_solids2_trim150_scaffold_1036_27
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24015..24311)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002FE5396
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KCB39761.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1036_28
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24629..25813)
DNA (1185bp) protein (395aa)
Phage-related integrase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZHK1_XANCT rbh
Phage-related integrase {ECO:0000313|EMBL:EKU26053.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1036_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26016..27104)
DNA (1089bp) protein (363aa)
Dihydroorotase {ECO:0000256|RuleBase:RU003440, ECO:0000256|SAAS:SAAS00189352}; EC=3.5.2.3 {ECO:0000256|RuleBase:RU003440, ECO:0000256|SAAS:SAAS00189348};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCP7_9GAMM
Displaying items 1-30 of 48 in total

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