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scnpilot_solids2_trim150_scaffold_1039

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1039_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..969
DNA (969bp) protein (323aa)
60 kDa chaperonin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3C1_9GAMM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chaperonin GroL
scnpilot_solids2_trim150_scaffold_1039_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1074..1619)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3C0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93961.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1039_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1791..3677)
DNA (1887bp) protein (629aa)
Phosphoglycerol transferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B9_9GAMM rbh
Phosphoglycerol transferase {ECO:0000313|EMBL:EIL93960.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
scnpilot_solids2_trim150_scaffold_1039_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3749..6679
DNA (2931bp) protein (977aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B8_9GAMM rbh
glutamine synthetase adenylyltransferase rbh
scnpilot_solids2_trim150_scaffold_1039_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6694..7668)
DNA (975bp) protein (325aa)
Putative nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B7_9GAMM rbh
Putative nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EIL93958.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative nucleoside-diphosphate-sugar epimerase
scnpilot_solids2_trim150_scaffold_1039_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7922..8506
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93957.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1039_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8566..9831)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93956.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Na+/proline symporter
scnpilot_solids2_trim150_scaffold_1039_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10027..10236
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97650.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1039_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10291..11442
DNA (1152bp) protein (384aa)
Glycosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B3_9GAMM rbh
Glycosyltransferase {ECO:0000313|EMBL:EIL93954.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycosyltransferase
scnpilot_solids2_trim150_scaffold_1039_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11518..12849
DNA (1332bp) protein (444aa)
Lipid A core--O-antigen ligase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B2_9GAMM rbh
Lipid A core--O-antigen ligase-like protein {ECO:0000313|EMBL:EIL93953.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lipid A core-O-antigen ligase-like enyme
scnpilot_solids2_trim150_scaffold_1039_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12839..13615
DNA (777bp) protein (259aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B1_9GAMM rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL93952.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycosyl transferase
scnpilot_solids2_trim150_scaffold_1039_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13609..14463)
DNA (855bp) protein (285aa)
Lipid A biosynthesis lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; EC=2.3.1.241 {ECO:0000256|HAMAP-Rule:MF_01942};; Kdo(2)-lipid IV(A) lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Lipid A biosynthesis lauroyl acyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B0_9GAMM rbh
lipid A biosynthesis lauroyl/palmitoleoyl acyltransferase
scnpilot_solids2_trim150_scaffold_1039_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14525..15892
DNA (1368bp) protein (456aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3A9_9GAMM rbh
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EIL93950.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-deoxy-D-manno-octulosonic-acid transferase rbh
scnpilot_solids2_trim150_scaffold_1039_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15962..17263)
DNA (1302bp) protein (434aa)
TolC family type I secretion outer membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3A8_9GAMM rbh
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EIL93949.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
type I secretion outer membrane protein, TolC family rbh
scnpilot_solids2_trim150_scaffold_1039_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17298..17957)
DNA (660bp) protein (220aa)
Protein-L-isoaspartate carboxylmethyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3A7_9GAMM rbh
Protein-L-isoaspartate carboxylmethyltransferase {ECO:0000313|EMBL:EIL93948.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protein-L-isoaspartate carboxylmethyltransferase
scnpilot_solids2_trim150_scaffold_1039_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18219..18884
DNA (666bp) protein (222aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3A6_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:EIL93947.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_1039_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18973..19557
DNA (585bp) protein (195aa)
Bacterioferritin (Cytochrome b1) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3A5_9GAMM rbh
Bacterioferritin (Cytochrome b1) {ECO:0000313|EMBL:EIL93946.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
bacterioferritin (cytochrome b1); K03594 bacterioferritin
scnpilot_solids2_trim150_scaffold_1039_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19643..20659)
DNA (1017bp) protein (339aa)
Oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3A4_9GAMM rbh
Oxidoreductase {ECO:0000313|EMBL:EIL93945.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
zinc-binding alcohol dehydrogenase family protein
scnpilot_solids2_trim150_scaffold_1039_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20719..20928)
DNA (210bp) protein (70aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3A3_9GAMM
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL93944.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transmembrane efflux protein; K08156 MFS transporter, DHA1 family, arabinose polymer transporter
Displaying 19 items

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