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scnpilot_solids2_trim150_scaffold_1057

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1057_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1057_2
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

254..625
DNA (372bp) protein (124aa)
Uncharacterized protein id=2861440 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tic20 domain containing protein {ECO:0000313|EMBL:KGQ20706.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein; K09940 hypothetical protein
scnpilot_solids2_trim150_scaffold_1057_3
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

797..1462
DNA (666bp) protein (222aa)
AcrR family transcriptional regulator n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003801633
AcrR family transcriptional regulator {ECO:0000313|EMBL:KDS88435.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1057_4
Paenibacillus wynnii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1495..2472
DNA (978bp) protein (326aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7B1_9CHLR
Alcohol dehydrogenase {ECO:0000313|EMBL:KGE17430.1}; TaxID=268407 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus wynnii.;"
alcohol dehydrogenase
scnpilot_solids2_trim150_scaffold_1057_5
unknown

Not on your lists

2588..4018
DNA (1431bp) protein (477aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1057_6
unknown

Not on your lists

4015..9045
DNA (5031bp) protein (1677aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1057_7
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9045..11030
DNA (1986bp) protein (662aa)
Fibronectin type III domain-containing protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237D20E
Fibronectin type III domain-containing protein
Fibronectin type III domain protein {ECO:0000313|EMBL:ADB73860.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
scnpilot_solids2_trim150_scaffold_1057_8
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11150..11428
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YYB5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM63333.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Mannose-6-phosphate isomerase
scnpilot_solids2_trim150_scaffold_1057_9
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(11675..12112)
DNA (438bp) protein (146aa)
Cytochrome c class I n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B0Z8_HERA2
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ABX05276.1}; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
scnpilot_solids2_trim150_scaffold_1057_10
unknown

Not on your lists

comp(12102..12254)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1057_11
RLO_OP11_Levybacteria_39_17, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(12341..12586)
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PKD6_MEIRD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OP11_Levybacteria_39_17_curated
scnpilot_solids2_trim150_scaffold_1057_12
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12657..13067)
DNA (411bp) protein (137aa)
Putative transposase orfB for insertion sequence element n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KS69_OSCVS
putative transposase orfB for insertion sequence element
Putative transposase orfB for insertion sequence element {ECO:0000313|EMBL:BAK97529.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
scnpilot_solids2_trim150_scaffold_1057_13
unknown

Not on your lists

comp(13064..13351)
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1057_14
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(13896..15539)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A7E2_DEIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ69731.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
scnpilot_solids2_trim150_scaffold_1057_15
unknown

Not on your lists

15985..16425
DNA (441bp) protein (147aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1057_16
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16621..16947
DNA (327bp) protein (109aa)
KaiB domain protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Z5H4_9RHIZ
KaiB domain protein {ECO:0000313|EMBL:EMS43589.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
KaiB domain-containing protein; K08481 circadian clock protein KaiB
scnpilot_solids2_trim150_scaffold_1057_17
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

16961..18448
DNA (1488bp) protein (496aa)
circadian clock protein KaiC (EC:2.7.11.1); K08482 circadian clock protein KaiC rbh
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ABU60179.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ABU60179.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
Putative circadian clock protein, KaiC n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRI3_ROSCS rbh
scnpilot_solids2_trim150_scaffold_1057_18
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18450..19310
DNA (861bp) protein (287aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PK70_9BURK
response regulator receiver modulated diguanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
scnpilot_solids2_trim150_scaffold_1057_19
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

19620..20414
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CW28_TRURR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI14291.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_1057_20
unknown

Not on your lists

comp(20379..20594)
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying 20 items

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