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scnpilot_solids2_trim150_scaffold_1064

Search features with annotation key words

Displaying items 31-60 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1064_31
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27974..28231)
-----------------
DNA (258bp)
protein (86aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000370D5A2
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1064_32
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28238..28966)
-----------------
DNA (729bp)
protein (243aa)
conjugal transfer protein TrbJ n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C0BFB
conjugal transfer protein TrbJ
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1064_33
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28963..31392)
-----------------
DNA (2430bp)
protein (810aa)
conjugal transfer protein TrbE n=1 Tax=Thiobacillus denitrificans RepID=UPI000365D4CA
Conjugal transfer protein TrbE {ECO:0000313|EMBL:AJP47674.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4
scnpilot_solids2_trim150_scaffold_1064_34
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31403..31675)
-----------------
DNA (273bp)
protein (91aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9MGR6_PSEAI
Conjugal transfer protein TrbD {ECO:0000313|EMBL:AJP47675.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
conjugal transfer protein; K03198 type IV secretion system protein VirB3
scnpilot_solids2_trim150_scaffold_1064_35
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31672..32004)
-----------------
DNA (333bp)
protein (111aa)
conjugal transfer protein TrbC n=1 Tax=Thiobacillus denitrificans RepID=UPI0003665B36
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AJP47676.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
scnpilot_solids2_trim150_scaffold_1064_36
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32001..33017)
-----------------
DNA (1017bp)
protein (339aa)
conjugal transfer protein TrbB n=1 Tax=Thiobacillus denitrificans RepID=UPI000374E989
Conjugal transfer protein TrbB {ECO:0000313|EMBL:AJP47677.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
type II secretion system protein E; K03196 type IV secretion system protein VirB11
scnpilot_solids2_trim150_scaffold_1064_37
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33014..33496)
-----------------
DNA (483bp)
protein (161aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F80A4
CopG family transcriptional regulator {ECO:0000313|EMBL:AJP47678.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
CopG/DNA-binding domain-containing protein
scnpilot_solids2_trim150_scaffold_1064_38
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33493..35484)
-----------------
DNA (1992bp)
protein (664aa)
conjugal transfer protein TraG n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C7ECF
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1064_39
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35776..36021)
-----------------
DNA (246bp)
protein (82aa)
Lipoprotein n=1 Tax=mine drainage metagenome RepID=T1CDB9_9ZZZZ
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1064_40
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36066..36971)
-----------------
DNA (906bp)
protein (302aa)
Transcriptional regulator, LysR family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ6_POLNA
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM39474.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
scnpilot_solids2_trim150_scaffold_1064_41
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37045..37287)
-----------------
DNA (243bp)
protein (81aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW57_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37867.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_solids2_trim150_scaffold_1064_42
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37520..38146)
-----------------
DNA (627bp)
protein (209aa)
Uncharacterized protein n=1 Tax=Thauera aminoaromatica S2 RepID=N6ZA65_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO89079.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1064_43
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38166..38903)
-----------------
DNA (738bp)
protein (246aa)
Uncharacterized protein n=1 Tax=Thauera aminoaromatica S2 RepID=N6Z3V4_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO89078.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1064_44
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38896..40152)
-----------------
DNA (1257bp)
protein (419aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW57_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37867.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_solids2_trim150_scaffold_1064_45
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40149..40451)
-----------------
DNA (303bp)
protein (101aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW58_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37868.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_solids2_trim150_scaffold_1064_46
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40444..43518)
-----------------
DNA (3075bp)
protein (1025aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW59_ACCPU
Cation efflux system protein CzcA {ECO:0000313|EMBL:KFB74620.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
heavy metal efflux pump, CzcA family; K07239 heavy-metal exporter, HME family
scnpilot_solids2_trim150_scaffold_1064_47
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43499..44623)
-----------------
DNA (1125bp)
protein (375aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW60_ACCPU
efflux transporter RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACV37870.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_solids2_trim150_scaffold_1064_48
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44728..45072)
-----------------
DNA (345bp)
protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:KFB74622.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
scnpilot_solids2_trim150_scaffold_1064_49
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(45108..45386)
-----------------
DNA (279bp)
protein (93aa)
Uncharacterized protein n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JVJ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCG91259.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
hypothetical protein; K07807 hypothetical protein NreA
scnpilot_solids2_trim150_scaffold_1064_50
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45540..47486
-----------------
DNA (1947bp)
protein (649aa)
Heavy metal translocating P-type ATPase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK06_9BURK rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EHR70978.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
heavy metal translocating P-type ATPase
scnpilot_solids2_trim150_scaffold_1064_51
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47572..49560)
-----------------
DNA (1989bp)
protein (663aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX8_POLNA
Type VI secretion protein {ECO:0000313|EMBL:AJP47688.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1064_52
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49805..50329)
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003743BE1
Peptidase {ECO:0000313|EMBL:AJP47689.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
putative conjugal transfer TRAF transmembrane protein
scnpilot_solids2_trim150_scaffold_1064_53
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50326..50859)
-----------------
DNA (534bp)
protein (178aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C0AB2
Transposase {ECO:0000313|EMBL:AJP47690.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1064_54
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50856..51101)
-----------------
DNA (246bp)
protein (82aa)
parB partition protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E0639
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1064_55
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51098..51736)
-----------------
DNA (639bp)
protein (213aa)
ParA n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BC195
cobyrinic acid a,c-diamide synthase; K03496 chromosome partitioning protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1064_56
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51942..52823)
-----------------
DNA (882bp)
protein (294aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D8D51 rbh
putative replication initiator and transcription repressor protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1064_57
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52846..53064)
-----------------
DNA (219bp)
protein (73aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003680820
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1064_58
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53264..54010)
-----------------
DNA (747bp)
protein (249aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F317D
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1064_59
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54256..54603)
-----------------
DNA (348bp)
protein (116aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B9263
putative lipoprotein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1064_60
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

55176..55391
-----------------
DNA (216bp)
protein (72aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
Displaying items 31-60 of 76 in total

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