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scnpilot_solids2_trim150_scaffold_1064

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Displaying items 61-76 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1064_61
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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55397..55768
-----------------
DNA (372bp)
protein (124aa)
NC domain protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNN3_AZOSU
NC domain protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_solids2_trim150_scaffold_1064_62
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55797..56474
-----------------
DNA (678bp)
protein (226aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F84F0 rbh
Transcriptional activator protein czcR {ECO:0000313|EMBL:CDQ12289.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
two component heavy metal response winged helix family transcriptional regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR rbh
scnpilot_solids2_trim150_scaffold_1064_63
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56479..57879
-----------------
DNA (1401bp)
protein (467aa)
heavy metal sensor signal transduction histidine kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037F7CA9 rbh
scnpilot_solids2_trim150_scaffold_1064_64
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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58030..59442
-----------------
DNA (1413bp)
protein (471aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F296B rbh
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG89161.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1064_65
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59445..60485
-----------------
DNA (1041bp)
protein (347aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036D4873 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89162.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1064_66
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60482..63604
-----------------
DNA (3123bp)
protein (1041aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003814170 rbh
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG89163.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids2_trim150_scaffold_1064_67
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63601..64806
-----------------
DNA (1206bp)
protein (402aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BHR9_RALP1 rbh
major facilitator superfamily protein rbh
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
scnpilot_solids2_trim150_scaffold_1064_68
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64824..66854
-----------------
DNA (2031bp)
protein (677aa)
hypothetical protein n=1 Tax=Pseudomonas RepID=UPI0003821A38
PA-phosphatase {ECO:0000313|EMBL:GAO35504.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
PA-phosphatase-like phosphoesterase
scnpilot_solids2_trim150_scaffold_1064_69
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(66808..67098)
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037E2A6E
Uncharacterized protein {ECO:0000313|EMBL:EPZ15169.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1064_70
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67150..67497)
-----------------
DNA (348bp)
protein (116aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003645152
Transposase {ECO:0000313|EMBL:AJP47696.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1064_71
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67710..68267)
-----------------
DNA (558bp)
protein (186aa)
Thiol:disulfide interchange protein DsbG n=2 Tax=Acidithiobacillus caldus RepID=F9ZS47_ACICS
Thiol:disulfide interchange protein DsbG; K03805 thiol:disulfide interchange protein DsbG
Tax=RBG_16_Betaproteobacteria_66_20_curated
scnpilot_solids2_trim150_scaffold_1064_72
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68267..68962)
-----------------
DNA (696bp)
protein (232aa)
Putative cytochrome c biogenesis protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX3_9GAMM
Cytochrome C biogenesis transmembrane region family protein {ECO:0000313|EMBL:AJZ56257.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
putative Cytochrome c biogenesis protein
scnpilot_solids2_trim150_scaffold_1064_73
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68988..69248)
-----------------
DNA (261bp)
protein (87aa)
Thioredoxin/glutaredoxin id=1311325 bin=GWE1_T_denit_62_9 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
thioredoxin/glutaredoxin
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_1064_74
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69241..69672)
-----------------
DNA (432bp)
protein (144aa)
MerR family transcriptional regulator id=1311326 bin=GWE1_T_denit_62_9 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
MerR family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_1064_75
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69863..70099
-----------------
DNA (237bp)
protein (79aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000360D4A0
copper chaperone
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
scnpilot_solids2_trim150_scaffold_1064_76
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70122..72617
-----------------
DNA (2496bp)
protein (832aa)
Heavy metal translocating P-type ATPase n=1 Tax=Oceanibaculum indicum P24 RepID=K2ID92_9PROT
heavy metal translocating P-type ATPase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Displaying items 61-76 of 76 in total

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